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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
143 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181525887
OGHJ01001311
24650
Bacillota
TAA
Leu
>WENV181525945
OGHJ01001544
24650
Bacillota
TAA
Leu
>WENV181525378
OGHJ01000200
243647
Bacillota
TTT
Lys
>WENV181525565
OGHJ01000436
16842
Bacillota
CGA
Ser
>WENV181525062
OGHJ01000002
240192
Bacillota
CTG
Gln
>WENV181526730
OGHJ01033067
37213
Bacillota
TGA
Ser
>WENV181526225
OGHJ01003779
144612
Bacillota
TCT
Arg
>WENV181526389
OGHJ01006873
144612
Bacillota
TCT
Arg
>WENV181526664
OGHJ01022861
144612
Bacillota
TCT
Arg
>WENV181526936
OGHJ01094451
146699
Bacillota
TCG
Arg
>WENV181526912
OGHJ01080852
156189
Bacillota
GAT
Ile
>WENV181525578
OGHJ01000442
147487
Bacillota
ACG
Arg
>WENV181526373
OGHJ01006544
338152
Bacillota
TTC
Glu
>WENV181526264
OGHJ01004363
148239
Bacillota
TCT
Arg
>WENV181526037
OGHJ01002050
44854
Bacillota
TGA
Ser
>WENV181526329
OGHJ01005422
44854
Bacillota
TGA
Ser
>WENV181525061
OGHJ01000002
238489
Bacillota
GTC
Asp
>WENV181526633
OGHJ01019644
235154
Bacillota
GTT
Asn
>WENV181526111
OGHJ01002543
241441
Bacillota
GCC
Gly
>WENV181526098
OGHJ01002407
347827
Bacillota
TTC
Glu
>WENV181526677
OGHJ01024902
246023
Bacillota
TGC
Ala
>WENV181525933
OGHJ01001478
277175
Bacillota
CTT
Lys
>WENV181525934
OGHJ01001478
277175
Bacillota
CTT
Lys
>WENV181526688
OGHJ01026598
338147
Bacillota
CTC
Glu
>WENV181526762
OGHJ01038659
235150
Bacillota
TGC
Ala
>WENV181525265
OGHJ01000096
155273
Bacillota
CAT
Met
>WENV181526833
OGHJ01058053
235294
Bacillota
TGC
Ala
>WENV181525889
OGHJ01001320
149311
Bacillota
CCT
Arg
>WENV181525058
OGHJ01000002
149310
Bacillota
TCT
Arg
>WENV181526238
OGHJ01003958
341763
Bacillota
CTC
Glu
>WENV181526935
OGHJ01094451
412107
Bacillota
TCC
Gly
>WENV181525575
OGHJ01000442
238211
Bacillota
TGT
Thr
>WENV181526355
OGHJ01005946
182792
Bacillota
GTC
Asp
>WENV181526358
OGHJ01005976
182792
Bacillota
GTC
Asp
>WENV181525354
OGHJ01000182
16834
Bacillota
GCT
Ser
>WENV181526103
OGHJ01002463
11034
Bacillota
GGA
Ser
>WENV181526682
OGHJ01025866
247057
Bacillota
TGC
Ala
>WENV181525440
OGHJ01000274
339151
Bacillota
TTC
Glu
>WENV181526265
OGHJ01004363
156937
Bacillota
GTG
His
>WENV181526892
OGHJ01074231
156937
Bacillota
GTG
His
>WENV181525284
OGHJ01000122
114002
Bacillota
CAA
Leu
>WENV181525611
OGHJ01000519
274189
Bacillota
TGT
Thr
>WENV181525884
OGHJ01001309
274189
Bacillota
TGT
Thr
>WENV181526003
OGHJ01001845
274189
Bacillota
TGT
Thr
>WENV181525275
OGHJ01000110
37437
Bacillota
TAA
Leu
>WENV181526589
OGHJ01016143
235079
Bacillota
GAA
Phe
>WENV181526846
OGHJ01059450
173314
Bacillota
GAT
Ile
>WENV181525380
OGHJ01000200
243612
Bacillota
TAC
Val
>WENV181525938
OGHJ01001511
245298
Bacillota
CGG
Pro
>WENV181526327
OGHJ01005415
245298
Bacillota
CGG
Pro
>WENV181526566
OGHJ01014505
245298
Bacillota
CGG
Pro
>WENV181526324
OGHJ01005352
37269
Bacillota
TGA
Ser
>WENV181525433
OGHJ01000267
287000
Bacillota
GTT
Asn
>WENV181525434
OGHJ01000267
287000
Bacillota
GTT
Asn
>WENV181526443
OGHJ01008551
169968
Bacillota
CAT
Met
>WENV181526291
OGHJ01004820
413152
Bacillota
TCC
Gly
>WENV181525580
OGHJ01000442
149309
Bacillota
CGG
Pro
>WENV181525101
OGHJ01000010
147135
Bacillota
ACG
Arg
>WENV181525574
OGHJ01000442
240190
Bacillota
TTT
Lys
>WENV181526491
OGHJ01010595
144610
Bacillota
GTG
His
>WENV181525937
OGHJ01001511
411547
Bacillota
CTG
Gln
>WENV181526202
OGHJ01003415
411547
Bacillota
CTG
Gln
>WENV181526280
OGHJ01004619
411547
Bacillota
CTG
Gln
>WENV181526326
OGHJ01005415
411547
Bacillota
CTG
Gln
>WENV181526565
OGHJ01014505
411547
Bacillota
CTG
Gln
>WENV181526691
OGHJ01026844
411547
Bacillota
CTG
Gln
>WENV181526397
OGHJ01007092
147684
Bacillota
ACG
Arg
>WENV181526038
OGHJ01002050
4624
Bacillota
GCT
Ser
>WENV181526330
OGHJ01005422
4624
Bacillota
GCT
Ser
>WENV181525105
OGHJ01000010
342895
Bacillota
CAT
Met
>WENV181525160
OGHJ01000039
37363
Bacillota
AAG
Leu
>WENV181525057
OGHJ01000002
412886
Bacillota
CCC
Gly
>WENV181526917
OGHJ01083361
412387
Bacillota
GCA
Cys
>WENV181526167
OGHJ01003003
18852
Bacillota
GCT
Ser
>WENV181526256
OGHJ01004225
235095
Bacillota
GGT
Thr
>WENV181526356
OGHJ01005946
235095
Bacillota
GGT
Thr
>WENV181526359
OGHJ01005976
235095
Bacillota
GGT
Thr
>WENV181525566
OGHJ01000436
194150
Bacillota
TGG
Pro
>WENV181526606
OGHJ01017370
239832
Bacillota
TGT
Thr
>WENV181525589
OGHJ01000468
250349
Bacillota
GAA
Phe
>WENV181525595
OGHJ01000484
419639
Bacillota
GCA
Cys
>WENV181526465
OGHJ01009296
411549
Bacillota
TTG
Gln
>WENV181526489
OGHJ01010567
411549
Bacillota
TTG
Gln
>WENV181526564
OGHJ01014378
411549
Bacillota
TTG
Gln
>WENV181526934
OGHJ01094451
339363
Bacillota
GCC
Gly
>WENV181526300
OGHJ01004854
154711
Bacillota
TGG
Pro
>WENV181525671
OGHJ01000614
85288
Bacillota
GTA
Tyr
>WENV181525673
OGHJ01000614
240193
Bacillota
GTG
His
>WENV181526378
OGHJ01006576
148188
Bacillota
CCG
Arg
>WENV181526481
OGHJ01010229
148188
Bacillota
CCG
Arg
>WENV181526480
OGHJ01010166
237846
Bacillota
GCC
Gly
>WENV181525888
OGHJ01001313
80612
Bacillota
GTA
Tyr
>WENV181525588
OGHJ01000468
235197
Bacillota
GTC
Asp
>WENV181525273
OGHJ01000110
368876
Bacillota
GCC
Gly
>WENV181525572
OGHJ01000442
240191
Bacillota
GGT
Thr
>WENV181526514
OGHJ01011697
241432
Bacillota
TGT
Thr
>WENV181526208
OGHJ01003448
235124
Bacillota
TGG
Pro
>WENV181526388
OGHJ01006852
235124
Bacillota
TGG
Pro
>WENV181526553
OGHJ01013734
235124
Bacillota
TGG
Pro
>WENV181525063
OGHJ01000002
16596
Bacillota
CGA
Ser
>WENV181526057
OGHJ01002122
254433
Bacillota
TAC
Val
>WENV181526229
OGHJ01003847
338129
Bacillota
TGT
Thr
>WENV181525552
OGHJ01000411
157838
Bacillota
GTC
Asp
>WENV181525921
OGHJ01001424
157838
Bacillota
GTC
Asp
>WENV181526823
OGHJ01054907
237284
Bacillota
TAC
Val
>WENV181525441
OGHJ01000274
258820
Bacillota
CGT
Thr
>WENV181525381
OGHJ01000200
243613
Bacillota
GTG
His
>WENV181525059
OGHJ01000002
59727
Bacillota
CAG
Leu
>WENV181526483
OGHJ01010256
144583
Bacillota
ACG
Arg
>WENV181526582
OGHJ01015718
247734
Bacillota
TGC
Ala
>WENV181526814
OGHJ01053272
419877
Bacillota
TCC
Gly
>WENV181526354
OGHJ01005946
235171
Bacillota
CCA
Trp
>WENV181526021
OGHJ01001978
238974
Bacillota
GAA
Phe
>WENV181526456
OGHJ01008865
238974
Bacillota
GAA
Phe
>WENV181525376
OGHJ01000200
152491
Bacillota
CAT
Met
>WENV181526822
OGHJ01054907
353527
Bacillota
TTC
Glu
>WENV181525721
OGHJ01000739
243098
Bacillota
GGT
Thr
>WENV181526362
OGHJ01006027
58712
Bacillota
CAG
Leu
>WENV181526522
OGHJ01011901
58712
Bacillota
CAG
Leu
>WENV181526218
OGHJ01003683
157719
Bacillota
CAT
Met
>WENV181526066
OGHJ01002190
245296
Bacillota
CCC
Gly
>WENV181526414
OGHJ01007614
245296
Bacillota
CCC
Gly
>WENV181525372
OGHJ01000200
273029
Bacillota
TGT
Thr
>WENV181525977
OGHJ01001695
344240
Bacillota
GCC
Gly
>WENV181525375
OGHJ01000200
281472
Bacillota
GGT
Thr
>WENV181525568
OGHJ01000436
178024
Bacillota
TCT
Arg
>WENV181526274
OGHJ01004534
144594
Bacillota
CAC
Val
>WENV181525587
OGHJ01000461
413657
Bacillota
CCC
Gly
>WENV181525674
OGHJ01000614
375269
Bacillota
TTG
Gln
>WENV181525936
OGHJ01001493
272488
Bacillota
GAA
Phe
>WENV181525672
OGHJ01000614
412118
Bacillota
>WENV181525676
OGHJ01000614
45160
Bacillota
CAA
Leu
>WENV181526301
OGHJ01004854
148144
Bacillota
CAT
Met
>WENV181526780
OGHJ01042387
119513
Bacillota
CAA
Leu
>WENV181526458
OGHJ01008865
238945
Bacillota
GCC
Gly
>WENV181526255
OGHJ01004220
249259
Bacillota
GCC
Gly
>WENV181525377
OGHJ01000200
287034
Bacillota
GTT
Asn
>WENV181525551
OGHJ01000411
263523
Bacillota
TAC
Val
>WENV181526594
OGHJ01016446
273862
Bacillota
TGC
Ala
>WENV181525382
OGHJ01000200
343027
Bacillota
TTG
Gln
>WENV181526288
OGHJ01004714
338131
Bacillota
GCC
Gly
>WENV181526083
OGHJ01002298
338128
Bacillota
TTC
Glu
>WENV181525601
OGHJ01000487
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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