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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181813972
OGTE01000032
243647
Bacillota
TTT
Lys
>WENV181813981
OGTE01000036
243647
Bacillota
TTT
Lys
>WENV181813899
OGTE01000007
16842
Bacillota
CGA
Ser
>WENV181814062
OGTE01003417
339904
Bacillota
GCC
Gly
>WENV181814075
OGTE01003873
340021
Bacillota
CTC
Glu
>WENV181814031
OGTE01000587
235287
Bacillota
TTT
Lys
>WENV181814045
OGTE01000947
235287
Bacillota
TTT
Lys
>WENV181814019
OGTE01000573
338544
Bacillota
TGT
Thr
>WENV181814068
OGTE01003690
16285
Bacillota
GCT
Ser
>WENV181813973
OGTE01000032
391536
Bacillota
TTC
Glu
>WENV181813977
OGTE01000032
391536
Bacillota
TTC
Glu
>WENV181814060
OGTE01003417
235903
Bacillota
TTT
Lys
>WENV181813901
OGTE01000007
16834
Bacillota
GCT
Ser
>WENV181814083
OGTE01005200
58829
Bacillota
CAA
Leu
>WENV181813877
OGTE01000001
114002
Bacillota
CAA
Leu
>WENV181813974
OGTE01000032
243612
Bacillota
TAC
Val
>WENV181813978
OGTE01000032
243612
Bacillota
TAC
Val
>WENV181813872
OGTE01000001
147135
Bacillota
ACG
Arg
>WENV181814059
OGTE01003417
338548
Bacillota
TTG
Gln
>WENV181814048
OGTE01001754
243345
Bacillota
GAA
Phe
>WENV181814018
OGTE01000573
312468
Bacillota
TAC
Val
>WENV181814024
OGTE01000587
312468
Bacillota
TAC
Val
>WENV181814038
OGTE01000587
312468
Bacillota
TAC
Val
>WENV181814067
OGTE01003690
16252
Bacillota
TGA
Ser
>WENV181814064
OGTE01003417
147692
Bacillota
TCG
Arg
>WENV181813951
OGTE01000020
314670
Bacillota
GAA
Phe
>WENV181814016
OGTE01000564
367412
Bacillota
GTT
Asn
>WENV181813905
OGTE01000007
194150
Bacillota
TGG
Pro
>WENV181814041
OGTE01000704
292025
Bacillota
TGG
Pro
>WENV181814077
OGTE01004111
292025
Bacillota
TGG
Pro
>WENV181813866
OGTE01000001
235197
Bacillota
GTC
Asp
>WENV181813902
OGTE01000007
235197
Bacillota
GTC
Asp
>WENV181813868
OGTE01000001
368876
Bacillota
GCC
Gly
>WENV181813970
OGTE01000032
368876
Bacillota
GCC
Gly
>WENV181813975
OGTE01000032
368876
Bacillota
GCC
Gly
>WENV181814058
OGTE01003417
235905
Bacillota
GTG
His
>WENV181814063
OGTE01003417
411739
Bacillota
TCC
Gly
>WENV181814078
OGTE01004111
411739
Bacillota
TCC
Gly
>WENV181814017
OGTE01000573
113978
Bacillota
GTA
Tyr
>WENV181813979
OGTE01000036
243613
Bacillota
GTG
His
>WENV181813995
OGTE01000057
152491
Bacillota
CAT
Met
>WENV181813991
OGTE01000057
273029
Bacillota
TGT
Thr
>WENV181813994
OGTE01000057
281472
Bacillota
GGT
Thr
>WENV181814061
OGTE01003417
95697
Bacillota
TAG
Leu
>WENV181813907
OGTE01000007
178024
Bacillota
TCT
Arg
>WENV181813878
OGTE01000001
413657
Bacillota
CCC
Gly
>WENV181813996
OGTE01000139
256939
Bacillota
GGT
Thr
>WENV181813971
OGTE01000032
287034
Bacillota
GTT
Asn
>WENV181813976
OGTE01000032
287034
Bacillota
GTT
Asn
>WENV181813980
OGTE01000036
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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