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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183307095
OLTD01000726
24650
Bacillota
TAA
Leu
>WENV183307269
OLTD01010208
45408
Bacillota
AAG
Leu
>WENV183307262
OLTD01008352
238169
Bacillota
AGT
Thr
>WENV183306865
OLTD01000001
267649
Bacillota
TAC
Val
>WENV183306867
OLTD01000001
267649
Bacillota
TAC
Val
>WENV183307028
OLTD01000245
340263
Bacillota
TTC
Glu
>WENV183307282
OLTD01014851
235154
Bacillota
GTT
Asn
>WENV183307072
OLTD01000478
148348
Bacillota
GTC
Asp
>WENV183307109
OLTD01000920
277175
Bacillota
CTT
Lys
>WENV183306999
OLTD01000137
239080
Bacillota
CTG
Gln
>WENV183307073
OLTD01000478
239076
Bacillota
GAA
Phe
>WENV183306956
OLTD01000083
235697
Bacillota
GTT
Asn
>WENV183307243
OLTD01005843
147481
Bacillota
CGG
Pro
>WENV183307115
OLTD01000950
96360
Bacillota
GTA
Tyr
>WENV183307077
OLTD01000509
340265
Bacillota
GCC
Gly
>WENV183307088
OLTD01000612
340265
Bacillota
GCC
Gly
>WENV183307256
OLTD01007496
278411
Bacillota
CTT
Lys
>WENV183307261
OLTD01008320
412387
Bacillota
GCA
Cys
>WENV183307018
OLTD01000240
18852
Bacillota
GCT
Ser
>WENV183307076
OLTD01000500
18852
Bacillota
GCT
Ser
>WENV183307074
OLTD01000478
239079
Bacillota
TAC
Val
>WENV183307152
OLTD01001676
59296
Bacillota
AAG
Leu
>WENV183307070
OLTD01000458
235127
Bacillota
TTT
Lys
>WENV183307246
OLTD01006158
147674
Bacillota
TCT
Arg
>WENV183307270
OLTD01010273
239838
Bacillota
CTG
Gln
>WENV183307281
OLTD01014122
342936
Bacillota
CCT
Arg
>WENV183307232
OLTD01005530
235523
Bacillota
GAA
Phe
>WENV183307191
OLTD01002713
59664
Bacillota
CAG
Leu
>WENV183307098
OLTD01000738
239078
Bacillota
TTT
Lys
>WENV183307192
OLTD01002730
339828
Bacillota
TTC
Glu
>WENV183307231
OLTD01005530
147518
Bacillota
GTC
Asp
>WENV183306962
OLTD01000086
242686
Bacillota
TGC
Ala
>WENV183307069
OLTD01000458
272488
Bacillota
GAA
Phe
>WENV183307149
OLTD01001526
272488
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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