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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183428743
OMBO01000221
37528
Bacillota
AAG
Leu
>WENV183428767
OMBO01000245
37528
Bacillota
AAG
Leu
>WENV183429091
OMBO01002088
24650
Bacillota
TAA
Leu
>WENV183429230
OMBO01006502
155958
Bacillota
GAT
Ile
>WENV183428762
OMBO01000240
237957
Bacillota
GTT
Asn
>WENV183428463
OMBO01000007
240192
Bacillota
CTG
Gln
>WENV183429119
OMBO01002524
158247
Bacillota
>WENV183429100
OMBO01002197
144612
Bacillota
TCT
Arg
>WENV183428869
OMBO01000408
147487
Bacillota
ACG
Arg
>WENV183429370
OMBO01016374
235098
Bacillota
GAC
Val
>WENV183428742
OMBO01000221
16438
Bacillota
GGA
Ser
>WENV183429514
OMBO01036283
250201
Bacillota
TGC
Ala
>WENV183429353
OMBO01015678
44854
Bacillota
TGA
Ser
>WENV183429470
OMBO01028168
238489
Bacillota
GTC
Asp
>WENV183429476
OMBO01030012
235154
Bacillota
GTT
Asn
>WENV183428934
OMBO01000588
80951
Bacillota
CAG
Leu
>WENV183429222
OMBO01006200
59312
Bacillota
CAG
Leu
>WENV183429485
OMBO01030775
238910
Bacillota
CTT
Lys
>WENV183428960
OMBO01000771
60319
Bacillota
TAA
Leu
>WENV183428746
OMBO01000225
155273
Bacillota
CAT
Met
>WENV183428714
OMBO01000175
149311
Bacillota
CCT
Arg
>WENV183429378
OMBO01017538
419288
Bacillota
GGT
Thr
>WENV183428625
OMBO01000085
149310
Bacillota
TCT
Arg
>WENV183428866
OMBO01000408
238211
Bacillota
TGT
Thr
>WENV183429449
OMBO01025856
144668
Bacillota
GTC
Asp
>WENV183429463
OMBO01027854
11034
Bacillota
GGA
Ser
>WENV183428763
OMBO01000240
339151
Bacillota
TTC
Glu
>WENV183428731
OMBO01000200
339816
Bacillota
CCG
Arg
>WENV183428971
OMBO01000842
152125
Bacillota
GTT
Asn
>WENV183429193
OMBO01004750
96360
Bacillota
GTA
Tyr
>WENV183428817
OMBO01000324
151821
Bacillota
CAT
Met
>WENV183428601
OMBO01000074
412338
Bacillota
GCA
Cys
>WENV183429361
OMBO01015939
173314
Bacillota
GAT
Ile
>WENV183428572
OMBO01000059
238189
Bacillota
CCT
Arg
>WENV183429260
OMBO01008531
338149
Bacillota
CTC
Glu
>WENV183429441
OMBO01024411
245298
Bacillota
CGG
Pro
>WENV183428821
OMBO01000324
16437
Bacillota
GCT
Ser
>WENV183428871
OMBO01000408
149309
Bacillota
CGG
Pro
>WENV183428777
OMBO01000251
152149
Bacillota
GTG
His
>WENV183428864
OMBO01000408
240190
Bacillota
TTT
Lys
>WENV183429288
OMBO01010855
144610
Bacillota
GTG
His
>WENV183428879
OMBO01000422
238415
Bacillota
CTT
Lys
>WENV183428752
OMBO01000226
240017
Bacillota
GCC
Gly
>WENV183429440
OMBO01024411
411547
Bacillota
CTG
Gln
>WENV183429354
OMBO01015678
4624
Bacillota
GCT
Ser
>WENV183428505
OMBO01000023
263765
Bacillota
TAC
Val
>WENV183428751
OMBO01000226
263765
Bacillota
TAC
Val
>WENV183428759
OMBO01000235
37363
Bacillota
AAG
Leu
>WENV183428462
OMBO01000007
412886
Bacillota
CCC
Gly
>WENV183429352
OMBO01015309
412387
Bacillota
GCA
Cys
>WENV183428758
OMBO01000235
347658
Bacillota
TTG
Gln
>WENV183428718
OMBO01000178
238188
Bacillota
CGT
Thr
>WENV183429362
OMBO01016006
411549
Bacillota
TTG
Gln
>WENV183429373
OMBO01016608
235925
Bacillota
TGC
Ala
>WENV183428740
OMBO01000216
37238
Bacillota
TAA
Leu
>WENV183429471
OMBO01028168
237956
Bacillota
GAA
Phe
>WENV183428757
OMBO01000235
85288
Bacillota
GTA
Tyr
>WENV183429389
OMBO01019142
256380
Bacillota
>WENV183429414
OMBO01022141
235127
Bacillota
TTT
Lys
>WENV183428633
OMBO01000097
240191
Bacillota
GGT
Thr
>WENV183428865
OMBO01000408
81630
Bacillota
TAG
Leu
>WENV183428734
OMBO01000201
163943
Bacillota
GTC
Asp
>WENV183428875
OMBO01000413
163943
Bacillota
GTC
Asp
>WENV183428839
OMBO01000359
238187
Bacillota
GGT
Thr
>WENV183429321
OMBO01012250
59274
Bacillota
CAA
Leu
>WENV183429296
OMBO01011144
235124
Bacillota
TGG
Pro
>WENV183428464
OMBO01000007
16596
Bacillota
CGA
Ser
>WENV183428949
OMBO01000706
23699
Bacillota
CGA
Ser
>WENV183429442
OMBO01024805
338129
Bacillota
TGT
Thr
>WENV183429168
OMBO01004104
157838
Bacillota
GTC
Asp
>WENV183428764
OMBO01000240
258820
Bacillota
CGT
Thr
>WENV183428626
OMBO01000085
59727
Bacillota
CAG
Leu
>WENV183429111
OMBO01002386
247734
Bacillota
TGC
Ala
>WENV183429261
OMBO01008531
144621
Bacillota
GTT
Asn
>WENV183429468
OMBO01028168
6950
Bacillota
TGA
Ser
>WENV183429381
OMBO01017840
58712
Bacillota
CAG
Leu
>WENV183429344
OMBO01014747
272992
Bacillota
CTT
Lys
>WENV183428713
OMBO01000171
338127
Bacillota
TTG
Gln
>WENV183429166
OMBO01003975
414486
Bacillota
CCC
Gly
>WENV183429070
OMBO01001827
272488
Bacillota
GAA
Phe
>WENV183428602
OMBO01000074
147496
Bacillota
TCT
Arg
>WENV183429184
OMBO01004395
7065
Bacillota
GCT
Ser
>WENV183429466
OMBO01028168
173292
Bacillota
CAT
Met
>WENV183428916
OMBO01000509
338128
Bacillota
TTC
Glu
>WENV183428920
OMBO01000532
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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