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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
153 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183506753
OMGY01002510
24650
Bacillota
TAA
Leu
>WENV183506432
OMGY01000827
196621
Bacillota
GTC
Asp
>WENV183506095
OMGY01000125
158247
Bacillota
>WENV183506807
OMGY01003041
144612
Bacillota
TCT
Arg
>WENV183507058
OMGY01006804
144612
Bacillota
TCT
Arg
>WENV183507093
OMGY01007454
144612
Bacillota
TCT
Arg
>WENV183507244
OMGY01012344
144612
Bacillota
TCT
Arg
>WENV183507550
OMGY01031465
154063
Bacillota
CGG
Pro
>WENV183506418
OMGY01000817
235287
Bacillota
TTT
Lys
>WENV183506770
OMGY01002729
267556
Bacillota
TAC
Val
>WENV183507019
OMGY01006225
235098
Bacillota
GAC
Val
>WENV183507182
OMGY01010025
235098
Bacillota
GAC
Val
>WENV183507362
OMGY01017602
235098
Bacillota
GAC
Val
>WENV183507061
OMGY01006821
338152
Bacillota
TTC
Glu
>WENV183507412
OMGY01020121
338152
Bacillota
TTC
Glu
>WENV183506493
OMGY01001039
98228
Bacillota
TAG
Leu
>WENV183506412
OMGY01000817
338544
Bacillota
TGT
Thr
>WENV183506483
OMGY01001009
44854
Bacillota
TGA
Ser
>WENV183507354
OMGY01017510
44854
Bacillota
TGA
Ser
>WENV183507576
OMGY01033380
235154
Bacillota
GTT
Asn
>WENV183506915
OMGY01004231
304022
Bacillota
GCC
Gly
>WENV183506929
OMGY01004372
304022
Bacillota
GCC
Gly
>WENV183507090
OMGY01007414
304022
Bacillota
GCC
Gly
>WENV183506255
OMGY01000413
59312
Bacillota
CAG
Leu
>WENV183505986
OMGY01000031
238910
Bacillota
CTT
Lys
>WENV183506307
OMGY01000536
97943
Bacillota
GTA
Tyr
>WENV183506445
OMGY01000873
338147
Bacillota
CTC
Glu
>WENV183506837
OMGY01003442
338147
Bacillota
CTC
Glu
>WENV183506838
OMGY01003442
338147
Bacillota
CTC
Glu
>WENV183507687
OMGY01048653
235150
Bacillota
TGC
Ala
>WENV183506007
OMGY01000042
235294
Bacillota
TGC
Ala
>WENV183506415
OMGY01000817
338208
Bacillota
>WENV183505920
OMGY01000004
281701
Bacillota
TGC
Ala
>WENV183507379
OMGY01018246
281701
Bacillota
TGC
Ala
>WENV183507345
OMGY01016765
345329
Bacillota
TTC
Glu
>WENV183506759
OMGY01002607
388249
Bacillota
GCA
Cys
>WENV183507232
OMGY01012033
388249
Bacillota
GCA
Cys
>WENV183506414
OMGY01000817
116350
Bacillota
TAG
Leu
>WENV183506596
OMGY01001525
429429
Bacillota
CCA
Trp
>WENV183506725
OMGY01002250
429429
Bacillota
CCA
Trp
>WENV183506812
OMGY01003093
429429
Bacillota
CCA
Trp
>WENV183506814
OMGY01003123
429429
Bacillota
CCA
Trp
>WENV183506963
OMGY01004826
429429
Bacillota
CCA
Trp
>WENV183506632
OMGY01001738
313454
Bacillota
GAA
Phe
>WENV183506731
OMGY01002274
313454
Bacillota
GAA
Phe
>WENV183506254
OMGY01000413
44859
Bacillota
AAG
Leu
>WENV183506378
OMGY01000700
44859
Bacillota
AAG
Leu
>WENV183506268
OMGY01000450
186380
Bacillota
GTC
Asp
>WENV183506417
OMGY01000817
235290
Bacillota
TTG
Gln
>WENV183506639
OMGY01001767
338550
Bacillota
>WENV183506762
OMGY01002628
114284
Bacillota
CAA
Leu
>WENV183506659
OMGY01001939
274189
Bacillota
TGT
Thr
>WENV183506914
OMGY01004231
235079
Bacillota
GAA
Phe
>WENV183507089
OMGY01007414
235079
Bacillota
GAA
Phe
>WENV183506423
OMGY01000817
144763
Bacillota
TGG
Pro
>WENV183506327
OMGY01000614
173314
Bacillota
GAT
Ile
>WENV183507464
OMGY01024268
316443
Bacillota
GTC
Asp
>WENV183505954
OMGY01000013
271471
Bacillota
GCC
Gly
>WENV183506421
OMGY01000817
144766
Bacillota
CAT
Met
>WENV183506806
OMGY01003034
245298
Bacillota
CGG
Pro
>WENV183507335
OMGY01016122
245298
Bacillota
CGG
Pro
>WENV183507428
OMGY01021172
245298
Bacillota
CGG
Pro
>WENV183506922
OMGY01004288
37269
Bacillota
TGA
Ser
>WENV183506897
OMGY01004049
155089
Bacillota
CAT
Met
>WENV183506515
OMGY01001141
287000
Bacillota
GTT
Asn
>WENV183506580
OMGY01001393
258936
Bacillota
GGT
Thr
>WENV183506361
OMGY01000659
162445
Bacillota
CAT
Met
>WENV183506771
OMGY01002729
162445
Bacillota
CAT
Met
>WENV183507747
OMGY01060864
201704
Bacillota
GAT
Ile
>WENV183506333
OMGY01000618
152492
Bacillota
GGG
Pro
>WENV183506597
OMGY01001537
152492
Bacillota
GGG
Pro
>WENV183506800
OMGY01003026
152492
Bacillota
GGG
Pro
>WENV183506836
OMGY01003440
152492
Bacillota
GGG
Pro
>WENV183507007
OMGY01006038
235078
Bacillota
TAC
Val
>WENV183506859
OMGY01003698
144610
Bacillota
GTG
His
>WENV183507521
OMGY01028513
144610
Bacillota
GTG
His
>WENV183506640
OMGY01001767
353537
Bacillota
GTT
Asn
>WENV183506805
OMGY01003034
411547
Bacillota
CTG
Gln
>WENV183506874
OMGY01003790
411547
Bacillota
CTG
Gln
>WENV183507073
OMGY01007201
411547
Bacillota
CTG
Gln
>WENV183507334
OMGY01016122
411547
Bacillota
CTG
Gln
>WENV183507427
OMGY01021172
411547
Bacillota
CTG
Gln
>WENV183506282
OMGY01000482
147684
Bacillota
ACG
Arg
>WENV183506730
OMGY01002273
147684
Bacillota
ACG
Arg
>WENV183506484
OMGY01001009
4624
Bacillota
GCT
Ser
>WENV183507355
OMGY01017510
4624
Bacillota
GCT
Ser
>WENV183505952
OMGY01000013
263765
Bacillota
TAC
Val
>WENV183506267
OMGY01000450
263765
Bacillota
TAC
Val
>WENV183506745
OMGY01002436
412387
Bacillota
GCA
Cys
>WENV183507466
OMGY01024268
109476
Bacillota
TAG
Leu
>WENV183506763
OMGY01002632
235095
Bacillota
GGT
Thr
>WENV183507184
OMGY01010122
235095
Bacillota
GGT
Thr
>WENV183506844
OMGY01003591
198159
Bacillota
CAT
Met
>WENV183507279
OMGY01013708
166468
Bacillota
TCG
Arg
>WENV183507258
OMGY01013032
235289
Bacillota
GTT
Asn
>WENV183506648
OMGY01001883
411549
Bacillota
TTG
Gln
>WENV183507086
OMGY01007369
411549
Bacillota
TTG
Gln
>WENV183506064
OMGY01000084
235142
Bacillota
CTT
Lys
>WENV183506501
OMGY01001051
235142
Bacillota
CTT
Lys
>WENV183506966
OMGY01004952
59296
Bacillota
AAG
Leu
>WENV183506424
OMGY01000817
144767
Bacillota
GTG
His
>WENV183506495
OMGY01001039
258997
Bacillota
CTT
Lys
>WENV183506996
OMGY01005703
148188
Bacillota
CCG
Arg
>WENV183507023
OMGY01006341
148188
Bacillota
CCG
Arg
>WENV183507243
OMGY01012274
148188
Bacillota
CCG
Arg
>WENV183506917
OMGY01004231
80612
Bacillota
GTA
Tyr
>WENV183507403
OMGY01019770
236012
Bacillota
GTC
Asp
>WENV183507000
OMGY01005812
256380
Bacillota
>WENV183506801
OMGY01003033
163943
Bacillota
GTC
Asp
>WENV183506435
OMGY01000832
298620
Bacillota
CAT
Met
>WENV183506788
OMGY01002918
411739
Bacillota
TCC
Gly
>WENV183506829
OMGY01003313
235638
Bacillota
GAA
Phe
>WENV183506927
OMGY01004313
235638
Bacillota
GAA
Phe
>WENV183507031
OMGY01006467
235124
Bacillota
TGG
Pro
>WENV183507140
OMGY01008693
235124
Bacillota
TGG
Pro
>WENV183507830
OMGY01080982
235506
Bacillota
TGC
Ala
>WENV183506779
OMGY01002855
237963
Bacillota
TTT
Lys
>WENV183506776
OMGY01002855
201667
Bacillota
TCT
Arg
>WENV183506883
OMGY01003925
338129
Bacillota
TGT
Thr
>WENV183506948
OMGY01004541
338129
Bacillota
TGT
Thr
>WENV183506777
OMGY01002855
279635
Bacillota
GTG
His
>WENV183506400
OMGY01000788
157838
Bacillota
GTC
Asp
>WENV183507845
OMGY01083969
144583
Bacillota
ACG
Arg
>WENV183507591
OMGY01035041
144652
Bacillota
GTC
Asp
>WENV183506431
OMGY01000827
235171
Bacillota
CCA
Trp
>WENV183506666
OMGY01001952
238974
Bacillota
GAA
Phe
>WENV183507599
OMGY01036131
238974
Bacillota
GAA
Phe
>WENV183506595
OMGY01001511
144621
Bacillota
GTT
Asn
>WENV183506241
OMGY01000386
235113
Bacillota
GAA
Phe
>WENV183507878
OMGY01099000
277200
Bacillota
GGC
Ala
>WENV183506266
OMGY01000450
353527
Bacillota
TTC
Glu
>WENV183506955
OMGY01004684
58712
Bacillota
CAG
Leu
>WENV183507144
OMGY01008802
58712
Bacillota
CAG
Leu
>WENV183507198
OMGY01010629
58712
Bacillota
CAG
Leu
>WENV183507363
OMGY01017693
58712
Bacillota
CAG
Leu
>WENV183507166
OMGY01009505
21693
Bacillota
GCT
Ser
>WENV183507217
OMGY01011385
157719
Bacillota
CAT
Met
>WENV183506416
OMGY01000817
144762
Bacillota
TCT
Arg
>WENV183507716
OMGY01052721
245296
Bacillota
CCC
Gly
>WENV183507479
OMGY01024929
344240
Bacillota
GCC
Gly
>WENV183507477
OMGY01024929
196632
Bacillota
GTC
Asp
>WENV183507568
OMGY01033046
299139
Bacillota
TGC
Ala
>WENV183506774
OMGY01002842
144594
Bacillota
CAC
Val
>WENV183506168
OMGY01000237
95563
Bacillota
GTA
Tyr
>WENV183506539
OMGY01001288
338127
Bacillota
TTG
Gln
>WENV183506910
OMGY01004161
414486
Bacillota
CCC
Gly
>WENV183507800
OMGY01072962
114075
Bacillota
TAG
Leu
>WENV183507637
OMGY01040902
119513
Bacillota
CAA
Leu
>WENV183507806
OMGY01073906
292012
Bacillota
TGC
Ala
>WENV183506579
OMGY01001393
376360
Bacillota
GCA
Cys
>WENV183506399
OMGY01000788
263523
Bacillota
TAC
Val
>WENV183506826
OMGY01003277
338128
Bacillota
TTC
Glu
>WENV183507478
OMGY01024929
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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