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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183743590
PJUJ01008258
266516
Alphaproteobacteria
TAC
Val
>WENV183743493
PJUJ01002283
96238
Alphaproteobacteria
GAG
Leu
>WENV183743664
PJUJ01017091
96238
Alphaproteobacteria
GAG
Leu
>WENV183743669
PJUJ01017540
96238
Alphaproteobacteria
GAG
Leu
>WENV183743730
PJUJ01032885
96238
Alphaproteobacteria
GAG
Leu
>WENV183743601
PJUJ01009063
267922
Alphaproteobacteria
CCA
Trp
>WENV183743727
PJUJ01032235
267922
Alphaproteobacteria
CCA
Trp
>WENV183743639
PJUJ01013165
31286
Alphaproteobacteria
GGA
Ser
>WENV183743235
PJUJ01000196
339457
Alphaproteobacteria
>WENV183743665
PJUJ01017163
339490
Alphaproteobacteria
GAC
Val
>WENV183743651
PJUJ01014394
97145
Alphaproteobacteria
TAG
Leu
>WENV183743658
PJUJ01015427
97145
Alphaproteobacteria
TAG
Leu
>WENV183743700
PJUJ01025530
97145
Alphaproteobacteria
TAG
Leu
>WENV183743337
PJUJ01000540
338274
Alphaproteobacteria
TAC
Val
>WENV183743388
PJUJ01000804
338274
Alphaproteobacteria
TAC
Val
>WENV183743361
PJUJ01000669
345469
Alphaproteobacteria
TGT
Thr
>WENV183743704
PJUJ01026339
101826
Alphaproteobacteria
TAG
Leu
>WENV183743629
PJUJ01012664
237579
Alphaproteobacteria
CTT
Lys
>WENV183743130
PJUJ01000047
147013
Alphaproteobacteria
TCT
Arg
>WENV183743239
PJUJ01000199
147013
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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