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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183746538
POYE01000522
266516
Alphaproteobacteria
TAC
Val
>WENV183746592
POYE01031026
411726
Alphaproteobacteria
GCA
Cys
>WENV183746571
POYE01018846
236134
Alphaproteobacteria
TAC
Val
>WENV183746590
POYE01029823
170352
Alphaproteobacteria
TCT
Arg
>WENV183746550
POYE01006166
417264
Alphaproteobacteria
CTG
Gln
>WENV183746602
POYE01036089
338622
Alphaproteobacteria
GTT
Asn
>WENV183746591
POYE01030372
25720
Alphaproteobacteria
CGA
Ser
>WENV183746577
POYE01021425
19688
Alphaproteobacteria
GCT
Ser
>WENV183746570
POYE01018253
146915
Alphaproteobacteria
CAT
Met
>WENV183746635
POYE01043488
237574
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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