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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1001852
SRR001308.91213
24425
Bacteroidota
GCT
Ser
>SRA1001764
SRR001308.41448
146962
Bacteroidota
CAT
Met
>SRA1001791
SRR001308.58302
146962
Bacteroidota
CAT
Met
>SRA1002047
SRR001308.209204
23420
Bacteroidota
GCT
Ser
>SRA1002330
SRR001308.377657
23420
Bacteroidota
GCT
Ser
>SRA1002316
SRR001308.371231
37199
Bacteroidota
TAA
Leu
>SRA1001969
SRR001308.155375
256304
Bacteroidota
TTT
Lys
>SRA1002161
SRR001308.276784
256304
Bacteroidota
TTT
Lys
>SRA1001702
SRR001308.4697
47461
Bacteroidota
TGA
Ser
>SRA1001730
SRR001308.20653
47461
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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