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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014388
AYRF01016733
102636
Gammaproteobacteria
CAG
Leu
>WENV170014372
AYRF01002886
281172
Gammaproteobacteria
CAT
Met
>WENV170014381
AYRF01010193
221027
Gammaproteobacteria
CAT
Met
>WENV170014363
AYRF01000231
178436
Gammaproteobacteria
CCG
Arg
>WENV170014414
AYRF01041983
346373
Gammaproteobacteria
GAA
Phe
>WENV170014374
AYRF01005109
118196
Gammaproteobacteria
GAG
Leu
>WENV170014373
AYRF01003518
480397
Gammaproteobacteria
GCA
Cys
>WENV170014400
AYRF01022838
29834
Gammaproteobacteria
GCT
Ser
>WENV170014379
AYRF01007840
8603
Gammaproteobacteria
GCT
Ser
>WENV170014390
AYRF01019065
20401
Gammaproteobacteria
GGA
Ser
>WENV170014410
AYRF01039300
178435
Gammaproteobacteria
GGT
Thr
>WENV170014399
AYRF01022528
125232
Gammaproteobacteria
TAG
Leu
>WENV170014380
AYRF01007983
178438
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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