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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170078967
CDZV01044754
407608
Thermodesulfobacteriota
TTG
Gln
>WENV170078174
CDZV01012363
214925
Thermodesulfobacteriota
GTC
Asp
>WENV170078175
CDZV01012363
214925
Thermodesulfobacteriota
GTC
Asp
>WENV170078735
CDZV01036153
214925
Thermodesulfobacteriota
GTC
Asp
>WENV170078736
CDZV01036153
214925
Thermodesulfobacteriota
GTC
Asp
>WENV170078475
CDZV01026721
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV170078146
CDZV01011379
175867
Thermodesulfobacteriota
GGG
Pro
>WENV170078147
CDZV01011379
175867
Thermodesulfobacteriota
GGG
Pro
>WENV170079065
CDZV01050275
175867
Thermodesulfobacteriota
GGG
Pro
>WENV170078445
CDZV01025691
295177
Thermodesulfobacteriota
CTT
Lys
>WENV170079176
CDZV01055025
294203
Thermodesulfobacteriota
GGC
Ala
>WENV170078356
CDZV01020933
294203
Thermodesulfobacteriota
GGC
Ala
>WENV170078981
CDZV01045861
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170078813
CDZV01040719
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170077866
CDZV01000490
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170077864
CDZV01000489
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170079172
CDZV01055009
183758
Thermodesulfobacteriota
CCA
Trp
>WENV170078125
CDZV01010653
302242
Thermodesulfobacteriota
GAA
Phe
>WENV170078702
CDZV01035235
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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