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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170345419
CETF01005828
184784
Gammaproteobacteria
TGG
Pro
>WENV170345605
CETF01038934
184230
Gammaproteobacteria
TCT
Arg
>WENV170345481
CETF01017363
189904
Gammaproteobacteria
CCA
Trp
>WENV170345389
CETF01001730
284132
Gammaproteobacteria
TTT
Lys
>WENV170345390
CETF01001730
284132
Gammaproteobacteria
TTT
Lys
>WENV170345503
CETF01020798
179284
Gammaproteobacteria
CAT
Met
>WENV170345385
CETF01000677
289747
Gammaproteobacteria
GTG
His
>WENV170345504
CETF01021244
184467
Gammaproteobacteria
TCT
Arg
>WENV170345886
CETF01108594
178469
Gammaproteobacteria
CAT
Met
>WENV170345521
CETF01023350
180053
Gammaproteobacteria
CAT
Met
>WENV170345849
CETF01100172
179286
Gammaproteobacteria
GGG
Pro
>WENV170345430
CETF01008101
287057
Gammaproteobacteria
GAA
Phe
>WENV170345749
CETF01063765
282550
Gammaproteobacteria
TAC
Val
>WENV170345426
CETF01006505
178583
Gammaproteobacteria
ACG
Arg
>WENV170345560
CETF01031274
282515
Gammaproteobacteria
TGC
Ala
>WENV170345624
CETF01043258
20487
Gammaproteobacteria
TGA
Ser
>WENV170345742
CETF01062628
20487
Gammaproteobacteria
TGA
Ser
>WENV170345383
CETF01000677
178473
Gammaproteobacteria
TGG
Pro
>WENV170345386
CETF01000677
178473
Gammaproteobacteria
TGG
Pro
>WENV170345604
CETF01038934
178473
Gammaproteobacteria
TGG
Pro
>WENV170345384
CETF01000677
178547
Gammaproteobacteria
TCT
Arg
>WENV170345455
CETF01013308
299462
Gammaproteobacteria
TTC
Glu
>WENV170345425
CETF01006505
179888
Gammaproteobacteria
ACG
Arg
>WENV170345841
CETF01098193
282683
Gammaproteobacteria
GGC
Ala
>WENV170345543
CETF01028438
290408
Gammaproteobacteria
GCC
Gly
>WENV170345423
CETF01006231
284040
Gammaproteobacteria
TGC
Ala
>WENV170345424
CETF01006505
8609
Gammaproteobacteria
GCT
Ser
>WENV170345891
CETF01109525
118371
Gammaproteobacteria
CAA
Leu
>WENV170345893
CETF01109682
400372
Gammaproteobacteria
CCT
Arg
>WENV170345399
CETF01003331
8635
Gammaproteobacteria
GCT
Ser
>WENV170345562
CETF01032377
282018
Gammaproteobacteria
TGT
Thr
>WENV170345538
CETF01027393
282018
Gammaproteobacteria
TGT
Thr
>WENV170345544
CETF01028438
481250
Gammaproteobacteria
GCA
Cys
>WENV170345741
CETF01062539
179710
Gammaproteobacteria
GAC
Val
>WENV170345644
CETF01046346
179710
Gammaproteobacteria
GAC
Val
>WENV170345813
CETF01084286
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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