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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170453742
CEVA01001596
176153
Alphaproteobacteria
CAT
Met
>WENV170453763
CEVA01002523
176153
Alphaproteobacteria
CAT
Met
>WENV170453943
CEVA01013830
446430
Alphaproteobacteria
CAC
Val
>WENV170454062
CEVA01020810
210530
Alphaproteobacteria
CGG
Pro
>WENV170454635
CEVA01051512
487436
Alphaproteobacteria
TCC
Gly
>WENV170454674
CEVA01053040
334086
Alphaproteobacteria
GGC
Ala
>WENV170454780
CEVA01060094
282981
Alphaproteobacteria
CCA
Trp
>WENV170454813
CEVA01062437
121250
Alphaproteobacteria
TAG
Leu
>WENV170455294
CEVA01100472
400514
Alphaproteobacteria
TTG
Gln
>WENV170455386
CEVA01107056
400517
Alphaproteobacteria
GGT
Thr
>WENV170455434
CEVA01110453
176153
Alphaproteobacteria
CAT
Met
>WENV170455641
CEVA01128422
350583
Alphaproteobacteria
TAC
Val
>WENV170455701
CEVA01132252
143406
Alphaproteobacteria
TAG
Leu
>WENV170456010
CEVA01162963
100184
Alphaproteobacteria
CAG
Leu
>WENV170456242
CEVA01187865
427571
Alphaproteobacteria
GCC
Gly
>WENV170456629
CEVA01220561
192275
Alphaproteobacteria
GTG
His
>WENV170457235
CEVA01316307
73523
Alphaproteobacteria
CAG
Leu
>WENV170457523
CEVA01454610
299458
Alphaproteobacteria
TTT
Lys
>WENV170457646
CEVA01488723
224292
Alphaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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