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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170477980
CEVJ01195290
360947
Alphaproteobacteria
TTT
Lys
>WENV170477764
CEVJ01125411
190614
Alphaproteobacteria
TGG
Pro
>WENV170477193
CEVJ01044753
446430
Alphaproteobacteria
CAC
Val
>WENV170477393
CEVJ01068422
401056
Alphaproteobacteria
TTC
Glu
>WENV170477869
CEVJ01165520
29596
Alphaproteobacteria
GCT
Ser
>WENV170476902
CEVJ01002909
20437
Alphaproteobacteria
GGA
Ser
>WENV170477173
CEVJ01042690
201940
Alphaproteobacteria
CAT
Met
>WENV170477724
CEVJ01107244
195445
Alphaproteobacteria
CAT
Met
>WENV170477788
CEVJ01135129
177003
Alphaproteobacteria
CCT
Arg
>WENV170477375
CEVJ01065629
509917
Alphaproteobacteria
TCC
Gly
>WENV170477564
CEVJ01085479
178731
Alphaproteobacteria
GTC
Asp
>WENV170477824
CEVJ01145938
400516
Alphaproteobacteria
TTG
Gln
>WENV170477359
CEVJ01063801
75222
Alphaproteobacteria
GAG
Leu
>WENV170477064
CEVJ01027620
399480
Alphaproteobacteria
GAA
Phe
>WENV170477356
CEVJ01063273
486348
Alphaproteobacteria
GCA
Cys
>WENV170476973
CEVJ01014039
97838
Alphaproteobacteria
GAG
Leu
>WENV170477623
CEVJ01091385
301916
Alphaproteobacteria
TAC
Val
>WENV170477765
CEVJ01125447
408543
Alphaproteobacteria
GAC
Val
>WENV170477057
CEVJ01026254
340918
Alphaproteobacteria
CGT
Thr
>WENV170476948
CEVJ01010025
121250
Alphaproteobacteria
TAG
Leu
>WENV170477618
CEVJ01091031
427571
Alphaproteobacteria
GCC
Gly
>WENV170477905
CEVJ01177100
192131
Alphaproteobacteria
GTC
Asp
>WENV170477439
CEVJ01074057
141247
Alphaproteobacteria
CAA
Leu
>WENV170477879
CEVJ01168260
398999
Alphaproteobacteria
GGT
Thr
>WENV170477687
CEVJ01095066
435083
Alphaproteobacteria
>WENV170477498
CEVJ01080735
29727
Alphaproteobacteria
CGA
Ser
>WENV170477233
CEVJ01049318
231082
Alphaproteobacteria
ACG
Arg
>WENV170477456
CEVJ01075508
192275
Alphaproteobacteria
GTG
His
>WENV170477590
CEVJ01087989
400544
Alphaproteobacteria
GGT
Thr
>WENV170477489
CEVJ01079840
481098
Alphaproteobacteria
CTG
Gln
>WENV170477682
CEVJ01094881
190625
Alphaproteobacteria
ACG
Arg
>WENV170477518
CEVJ01081163
282658
Alphaproteobacteria
CGT
Thr
>WENV170477988
CEVJ01196855
178736
Alphaproteobacteria
CCT
Arg
>WENV170477643
CEVJ01092354
398994
Alphaproteobacteria
GTT
Asn
>WENV170477910
CEVJ01179935
29495
Alphaproteobacteria
GCT
Ser
>WENV170477397
CEVJ01068993
283255
Alphaproteobacteria
GGC
Ala
>WENV170477100
CEVJ01032629
428327
Alphaproteobacteria
GCC
Gly
>WENV170477755
CEVJ01120700
190609
Alphaproteobacteria
TCT
Arg
>WENV170477669
CEVJ01094040
400386
Alphaproteobacteria
TTG
Gln
>WENV170477147
CEVJ01040342
398996
Alphaproteobacteria
GCC
Gly
>WENV170477640
CEVJ01092157
118150
Alphaproteobacteria
TAG
Leu
>WENV170477187
CEVJ01043898
332802
Alphaproteobacteria
GGC
Ala
>WENV170477616
CEVJ01090964
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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