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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170484736
CEVN01041324
360947
Alphaproteobacteria
TTT
Lys
>WENV170484411
CEVN01020220
179841
Alphaproteobacteria
CCT
Arg
>WENV170485531
CEVN01114710
399001
Alphaproteobacteria
GAC
Val
>WENV170484419
CEVN01020547
400694
Alphaproteobacteria
TTG
Gln
>WENV170484187
CEVN01003641
424450
Alphaproteobacteria
GGT
Thr
>WENV170485854
CEVN01144452
176146
Alphaproteobacteria
CAT
Met
>WENV170485709
CEVN01132925
400387
Alphaproteobacteria
GGT
Thr
>WENV170485101
CEVN01074357
234690
Alphaproteobacteria
CGG
Pro
>WENV170486027
CEVN01155115
73986
Alphaproteobacteria
CAG
Leu
>WENV170486486
CEVN01287378
368481
Alphaproteobacteria
TGC
Ala
>WENV170485114
CEVN01075409
183628
Alphaproteobacteria
CCG
Arg
>WENV170484500
CEVN01025970
435083
Alphaproteobacteria
>WENV170486686
CEVN01349594
33571
Alphaproteobacteria
TGA
Ser
>WENV170485319
CEVN01095965
145377
Alphaproteobacteria
>WENV170486070
CEVN01156841
212319
Alphaproteobacteria
GTG
His
>WENV170484977
CEVN01063941
228432
Alphaproteobacteria
TGG
Pro
>WENV170486692
CEVN01350061
488318
Alphaproteobacteria
TCC
Gly
>WENV170485585
CEVN01119402
398994
Alphaproteobacteria
GTT
Asn
>WENV170485506
CEVN01112134
195456
Alphaproteobacteria
CAT
Met
>WENV170485911
CEVN01149171
284796
Alphaproteobacteria
CGT
Thr
>WENV170485456
CEVN01107228
30763
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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