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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170521060
CEWF01055743
29419
Gammaproteobacteria
GGA
Ser
>WENV170520903
CEWF01029572
183804
Gammaproteobacteria
CAT
Met
>WENV170520755
CEWF01006594
20664
Gammaproteobacteria
GCT
Ser
>WENV170520800
CEWF01013482
73116
Gammaproteobacteria
CAA
Leu
>WENV170520773
CEWF01009973
178164
Gammaproteobacteria
GAT
Ile
>WENV170521223
CEWF01133090
118218
Gammaproteobacteria
TAG
Leu
>WENV170521266
CEWF01144804
178544
Gammaproteobacteria
CAT
Met
>WENV170521037
CEWF01054650
399050
Gammaproteobacteria
CCT
Arg
>WENV170520760
CEWF01007171
20618
Gammaproteobacteria
GGA
Ser
>WENV170520738
CEWF01004724
284022
Gammaproteobacteria
TGT
Thr
>WENV170520810
CEWF01015726
284022
Gammaproteobacteria
TGT
Thr
>WENV170520801
CEWF01013498
178025
Gammaproteobacteria
GAC
Val
>WENV170520729
CEWF01003676
178538
Gammaproteobacteria
GTC
Asp
>WENV170520939
CEWF01039764
73501
Gammaproteobacteria
GAG
Leu
>WENV170520774
CEWF01009973
307357
Gammaproteobacteria
TGC
Ala
>WENV170521007
CEWF01050482
30550
Gammaproteobacteria
GGA
Ser
>WENV170520991
CEWF01048183
178471
Gammaproteobacteria
GTT
Asn
>WENV170521264
CEWF01144154
20410
Gammaproteobacteria
TGA
Ser
>WENV170521148
CEWF01099534
184451
Gammaproteobacteria
CAT
Met
>WENV170520795
CEWF01013168
299227
Gammaproteobacteria
GTT
Asn
>WENV170521314
CEWF01150232
184459
Gammaproteobacteria
CAT
Met
>WENV170521114
CEWF01083200
57340
Gammaproteobacteria
GGA
Ser
>WENV170521196
CEWF01122974
280812
Gammaproteobacteria
GAA
Phe
>WENV170521289
CEWF01148404
56108
Gammaproteobacteria
TGA
Ser
>WENV170520835
CEWF01019617
286623
Gammaproteobacteria
GTT
Asn
>WENV170520816
CEWF01016463
176241
Gammaproteobacteria
CGG
Pro
>WENV170520929
CEWF01035985
118413
Gammaproteobacteria
TAG
Leu
>WENV170521123
CEWF01087655
78242
Gammaproteobacteria
TAA
Leu
>WENV170520880
CEWF01026182
401684
Gammaproteobacteria
CCT
Arg
>WENV170521069
CEWF01055844
73063
Gammaproteobacteria
TAA
Leu
>WENV170520726
CEWF01003344
29454
Gammaproteobacteria
GGA
Ser
>WENV170520932
CEWF01038275
481678
Gammaproteobacteria
GCA
Cys
>WENV170520821
CEWF01017129
306288
Gammaproteobacteria
GCC
Gly
>WENV170520777
CEWF01010366
117821
Gammaproteobacteria
GTA
Tyr
>WENV170520727
CEWF01003414
178549
Gammaproteobacteria
GTT
Asn
>WENV170520822
CEWF01017191
178532
Gammaproteobacteria
CCG
Arg
>WENV170521167
CEWF01109051
196907
Gammaproteobacteria
GAC
Val
>WENV170520931
CEWF01036837
180680
Gammaproteobacteria
GAC
Val
>WENV170520819
CEWF01016969
180678
Gammaproteobacteria
CCG
Arg
>WENV170520792
CEWF01012978
400184
Gammaproteobacteria
>WENV170520754
CEWF01006521
8609
Gammaproteobacteria
GCT
Ser
>WENV170521004
CEWF01050100
201377
Gammaproteobacteria
TGG
Pro
>WENV170520723
CEWF01003238
201377
Gammaproteobacteria
TGG
Pro
>WENV170520712
CEWF01001516
300318
Gammaproteobacteria
GGC
Ala
>WENV170520849
CEWF01020878
119044
Gammaproteobacteria
GTA
Tyr
>WENV170520852
CEWF01021023
186591
Gammaproteobacteria
ACG
Arg
>WENV170520721
CEWF01002820
186591
Gammaproteobacteria
ACG
Arg
>WENV170520747
CEWF01005536
282902
Gammaproteobacteria
TGT
Thr
>WENV170520926
CEWF01034970
140861
Gammaproteobacteria
GTA
Tyr
>WENV170521023
CEWF01052805
180679
Gammaproteobacteria
CCA
Trp
>WENV170520831
CEWF01018788
180679
Gammaproteobacteria
CCA
Trp
>WENV170521052
CEWF01055466
180679
Gammaproteobacteria
CCA
Trp
>WENV170520936
CEWF01038821
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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