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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170535492
CEWP01068088
226555
Gammaproteobacteria
GTC
Asp
>WENV170535038
CEWP01019140
178164
Gammaproteobacteria
GAT
Ile
>WENV170536482
CEWP01188499
314350
Gammaproteobacteria
CCA
Trp
>WENV170534890
CEWP01004795
351236
Gammaproteobacteria
TTT
Lys
>WENV170535840
CEWP01112650
178168
Gammaproteobacteria
ACG
Arg
>WENV170535208
CEWP01034544
243308
Gammaproteobacteria
TGG
Pro
>WENV170535618
CEWP01082350
242775
Gammaproteobacteria
TGG
Pro
>WENV170535370
CEWP01053244
176301
Gammaproteobacteria
GAT
Ile
>WENV170535233
CEWP01037080
282018
Gammaproteobacteria
TGT
Thr
>WENV170534894
CEWP01005409
282018
Gammaproteobacteria
TGT
Thr
>WENV170535829
CEWP01110925
179710
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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