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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170561127
CZCA01003231
31263
Betaproteobacteria
CGA
Ser
>WENV170560984
CZCA01001741
178984
Betaproteobacteria
TCT
Arg
>WENV170561244
CZCA01005017
283784
Betaproteobacteria
CTT
Lys
>WENV170561016
CZCA01001998
121190
Betaproteobacteria
CAA
Leu
>WENV170560982
CZCA01001741
5754
Betaproteobacteria
GCT
Ser
>WENV170561008
CZCA01001983
118309
Betaproteobacteria
TAG
Leu
>WENV170561128
CZCA01003231
178985
Betaproteobacteria
ACG
Arg
>WENV170561129
CZCA01003231
178985
Betaproteobacteria
ACG
Arg
>WENV170560848
CZCA01000745
118312
Betaproteobacteria
GAG
Leu
>WENV170561131
CZCA01003257
281681
Betaproteobacteria
TTT
Lys
>WENV170561106
CZCA01002940
178981
Betaproteobacteria
CAT
Met
>WENV170560995
CZCA01001771
344729
Betaproteobacteria
GCC
Gly
>WENV170560975
CZCA01001705
178982
Betaproteobacteria
TTG
Gln
>WENV170560996
CZCA01001771
481172
Betaproteobacteria
GCA
Cys
>WENV170560825
CZCA01000664
283781
Betaproteobacteria
TGC
Ala
>WENV170561477
CZCA01010645
414048
Betaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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