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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170563265
CZCB01012958
281440
Gammaproteobacteria
TGT
Thr
>WENV170563731
CZCB01027123
117915
Gammaproteobacteria
TAG
Leu
>WENV170562800
CZCB01005434
281437
Gammaproteobacteria
CCA
Trp
>WENV170563188
CZCB01011595
281441
Gammaproteobacteria
CCT
Arg
>WENV170563347
CZCB01015608
176795
Gammaproteobacteria
CAT
Met
>WENV170563268
CZCB01012958
399353
Gammaproteobacteria
GGT
Thr
>WENV170563605
CZCB01022590
176790
Gammaproteobacteria
ACG
Arg
>WENV170563266
CZCB01012958
140806
Gammaproteobacteria
GTA
Tyr
>WENV170562594
CZCB01003770
281436
Gammaproteobacteria
TGC
Ala
>WENV170563224
CZCB01012178
176791
Gammaproteobacteria
TGG
Pro
>WENV170563604
CZCB01022590
30083
Gammaproteobacteria
GCT
Ser
>WENV170563280
CZCB01013523
176798
Gammaproteobacteria
CAT
Met
>WENV170563226
CZCB01012178
281433
Gammaproteobacteria
GTG
His
>WENV170562593
CZCB01003770
176794
Gammaproteobacteria
GAT
Ile
>WENV170563669
CZCB01024630
205778
Gammaproteobacteria
GTC
Asp
>WENV170563239
CZCB01012353
176797
Gammaproteobacteria
CCG
Arg
>WENV170562736
CZCB01004889
178550
Gammaproteobacteria
ACG
Arg
>WENV170563879
CZCB01033408
301005
Gammaproteobacteria
TGC
Ala
>WENV170563225
CZCB01012178
176792
Gammaproteobacteria
TCT
Arg
>WENV170563431
CZCB01017781
20287
Gammaproteobacteria
GGA
Ser
>WENV170563267
CZCB01012958
480549
Gammaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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