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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170571475
FLOH01000169
188358
Gammaproteobacteria
CAT
Met
>WENV170573035
FLOH01004386
176544
Gammaproteobacteria
CAT
Met
>WENV170573032
FLOH01004386
176544
Gammaproteobacteria
CAT
Met
>WENV170571672
FLOH01000255
179189
Gammaproteobacteria
CAT
Met
>WENV170572485
FLOH01000922
209464
Gammaproteobacteria
CCG
Arg
>WENV170571603
FLOH01000223
176301
Gammaproteobacteria
GAT
Ile
>WENV170571832
FLOH01000333
311084
Gammaproteobacteria
GCC
Gly
>WENV170572871
FLOH01001456
319139
Gammaproteobacteria
GCC
Gly
>WENV170571224
FLOH01000102
141076
Gammaproteobacteria
GTA
Tyr
>WENV170572401
FLOH01000815
195896
Gammaproteobacteria
GTC
Asp
>WENV170572501
FLOH01000946
281791
Gammaproteobacteria
GTG
His
>WENV170572215
FLOH01000632
296680
Gammaproteobacteria
GTT
Asn
>WENV170572242
FLOH01000651
301369
Gammaproteobacteria
TAC
Val
>WENV170571673
FLOH01000255
317782
Gammaproteobacteria
TAC
Val
>WENV170573033
FLOH01004386
118640
Gammaproteobacteria
TAG
Leu
>WENV170571225
FLOH01000102
490292
Gammaproteobacteria
TCC
Gly
>WENV170571604
FLOH01000223
281418
Gammaproteobacteria
TGC
Ala
>WENV170571720
FLOH01000278
281418
Gammaproteobacteria
TGC
Ala
>WENV170572642
FLOH01001098
201377
Gammaproteobacteria
TGG
Pro
>WENV170572216
FLOH01000632
201377
Gammaproteobacteria
TGG
Pro
>WENV170571903
FLOH01000368
280681
Gammaproteobacteria
TGT
Thr
>WENV170573055
FLOH01005108
287558
Gammaproteobacteria
TTC
Glu
>WENV170573056
FLOH01005108
287558
Gammaproteobacteria
TTC
Glu
>WENV170573034
FLOH01004386
285547
Gammaproteobacteria
TTG
Gln
>WENV170572217
FLOH01000632
299414
Gammaproteobacteria
TTT
Lys
>WENV170572218
FLOH01000632
299414
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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