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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170635465
JDSF01029499
448425
Bacillota
TTC
Glu
>WENV170635477
JDSF01031079
448425
Bacillota
TTC
Glu
>WENV170635095
JDSF01000013
456201
Bacillota
GCC
Gly
>WENV170635155
JDSF01000140
456201
Bacillota
GCC
Gly
>WENV170635255
JDSF01000441
456201
Bacillota
GCC
Gly
>WENV170635414
JDSF01015015
456201
Bacillota
GCC
Gly
>WENV170635495
JDSF01034167
179563
Bacillota
GAT
Ile
>WENV170635219
JDSF01000315
227487
Bacillota
TGG
Pro
>WENV170635236
JDSF01000374
227487
Bacillota
TGG
Pro
>WENV170635443
JDSF01022895
227487
Bacillota
TGG
Pro
>WENV170635482
JDSF01031870
320459
Bacillota
CAT
Met
>WENV170635504
JDSF01036512
320459
Bacillota
CAT
Met
>WENV170635506
JDSF01036932
281271
Bacillota
TGC
Ala
>WENV170635168
JDSF01000159
284869
Bacillota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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