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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170646327
JQGR01000011
77412
Alphaproteobacteria
CAG
Leu
>WENV170646328
JQGR01000012
400514
Alphaproteobacteria
TTG
Gln
>WENV170646329
JQGR01000014
102490
Alphaproteobacteria
CAA
Leu
>WENV170646330
JQGR01000016
29701
Alphaproteobacteria
CGA
Ser
>WENV170646331
JQGR01000018
283256
Alphaproteobacteria
CGT
Thr
>WENV170646333
JQGR01000022
400384
Alphaproteobacteria
TTC
Glu
>WENV170646334
JQGR01000022
400384
Alphaproteobacteria
TTC
Glu
>WENV170646336
JQGR01000029
29729
Alphaproteobacteria
GCT
Ser
>WENV170646337
JQGR01000031
435083
Alphaproteobacteria
>WENV170646343
JQGR01000051
140963
Alphaproteobacteria
>WENV170646344
JQGR01000057
30763
Alphaproteobacteria
GGA
Ser
>WENV170646346
JQGR01000064
179388
Alphaproteobacteria
GTG
His
>WENV170646347
JQGR01000071
178728
Alphaproteobacteria
CGG
Pro
>WENV170646348
JQGR01000073
156125
Alphaproteobacteria
TCT
Arg
>WENV170646351
JQGR01000132
281676
Alphaproteobacteria
TAC
Val
>WENV170646354
JQGR01000133
439135
Alphaproteobacteria
CAC
Val
>WENV170646357
JQGR01000161
178503
Alphaproteobacteria
GGG
Pro
>WENV170646359
JQGR01000170
399480
Alphaproteobacteria
GAA
Phe
>WENV170646360
JQGR01000172
398996
Alphaproteobacteria
GCC
Gly
>WENV170646361
JQGR01000172
398996
Alphaproteobacteria
GCC
Gly
>WENV170646387
JQGR01000700
283257
Alphaproteobacteria
TTT
Lys
>WENV170646474
JQGR01011346
283556
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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