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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
169 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170665911
JYMV01031463
331330
Gammaproteobacteria
TAC
Val
>WENV170664356
JYMV01015662
281908
Gammaproteobacteria
GTG
His
>WENV170664359
JYMV01015662
281908
Gammaproteobacteria
GTG
His
>WENV170667418
JYMV01047263
281908
Gammaproteobacteria
GTG
His
>WENV170667421
JYMV01047263
281908
Gammaproteobacteria
GTG
His
>WENV170663770
JYMV01009222
73123
Gammaproteobacteria
CAA
Leu
>WENV170664819
JYMV01020194
73123
Gammaproteobacteria
CAA
Leu
>WENV170663192
JYMV01002984
123265
Gammaproteobacteria
GAG
Leu
>WENV170663271
JYMV01003583
123265
Gammaproteobacteria
GAG
Leu
>WENV170663953
JYMV01011073
123265
Gammaproteobacteria
GAG
Leu
>WENV170664747
JYMV01019577
123265
Gammaproteobacteria
GAG
Leu
>WENV170664987
JYMV01021508
123265
Gammaproteobacteria
GAG
Leu
>WENV170665119
JYMV01022721
123265
Gammaproteobacteria
GAG
Leu
>WENV170664583
JYMV01017906
183804
Gammaproteobacteria
CAT
Met
>WENV170666419
JYMV01036871
183804
Gammaproteobacteria
CAT
Met
>WENV170667718
JYMV01050743
178539
Gammaproteobacteria
GAC
Val
>WENV170667774
JYMV01051358
178164
Gammaproteobacteria
GAT
Ile
>WENV170667677
JYMV01050280
178164
Gammaproteobacteria
GAT
Ile
>WENV170667045
JYMV01043260
178164
Gammaproteobacteria
GAT
Ile
>WENV170665483
JYMV01026689
178164
Gammaproteobacteria
GAT
Ile
>WENV170667976
JYMV01053789
178164
Gammaproteobacteria
GAT
Ile
>WENV170666141
JYMV01033769
281275
Gammaproteobacteria
TGT
Thr
>WENV170666137
JYMV01033768
281275
Gammaproteobacteria
TGT
Thr
>WENV170664956
JYMV01021253
20273
Gammaproteobacteria
TGA
Ser
>WENV170663775
JYMV01009222
20273
Gammaproteobacteria
TGA
Ser
>WENV170666144
JYMV01033769
281276
Gammaproteobacteria
GGT
Thr
>WENV170666140
JYMV01033768
281276
Gammaproteobacteria
GGT
Thr
>WENV170664817
JYMV01020194
176662
Gammaproteobacteria
ACG
Arg
>WENV170664818
JYMV01020194
176662
Gammaproteobacteria
ACG
Arg
>WENV170665345
JYMV01025072
176662
Gammaproteobacteria
ACG
Arg
>WENV170665346
JYMV01025072
176662
Gammaproteobacteria
ACG
Arg
>WENV170665435
JYMV01026247
20618
Gammaproteobacteria
GGA
Ser
>WENV170666429
JYMV01036919
20618
Gammaproteobacteria
GGA
Ser
>WENV170666145
JYMV01033769
353123
Gammaproteobacteria
CCA
Trp
>WENV170667182
JYMV01044324
291796
Gammaproteobacteria
GGC
Ala
>WENV170663251
JYMV01003415
291796
Gammaproteobacteria
GGC
Ala
>WENV170666126
JYMV01033657
311084
Gammaproteobacteria
GCC
Gly
>WENV170665030
JYMV01021996
311084
Gammaproteobacteria
GCC
Gly
>WENV170663970
JYMV01011233
311084
Gammaproteobacteria
GCC
Gly
>WENV170663565
JYMV01006949
311084
Gammaproteobacteria
GCC
Gly
>WENV170666139
JYMV01033768
399250
Gammaproteobacteria
TCC
Gly
>WENV170666143
JYMV01033769
399250
Gammaproteobacteria
TCC
Gly
>WENV170665267
JYMV01024087
281282
Gammaproteobacteria
TTC
Glu
>WENV170664949
JYMV01021253
281282
Gammaproteobacteria
TTC
Glu
>WENV170664821
JYMV01020194
281282
Gammaproteobacteria
TTC
Glu
>WENV170663777
JYMV01009222
281282
Gammaproteobacteria
TTC
Glu
>WENV170665952
JYMV01031820
74240
Gammaproteobacteria
CAA
Leu
>WENV170664084
JYMV01012689
74240
Gammaproteobacteria
CAA
Leu
>WENV170667674
JYMV01050242
329164
Gammaproteobacteria
TTT
Lys
>WENV170667673
JYMV01050242
329164
Gammaproteobacteria
TTT
Lys
>WENV170667308
JYMV01045750
329164
Gammaproteobacteria
TTT
Lys
>WENV170665093
JYMV01022471
329164
Gammaproteobacteria
TTT
Lys
>WENV170664955
JYMV01021253
329164
Gammaproteobacteria
TTT
Lys
>WENV170664954
JYMV01021253
329164
Gammaproteobacteria
TTT
Lys
>WENV170663495
JYMV01006109
329164
Gammaproteobacteria
TTT
Lys
>WENV170663494
JYMV01006108
329164
Gammaproteobacteria
TTT
Lys
>WENV170666713
JYMV01040054
13452
Gammaproteobacteria
GCT
Ser
>WENV170664564
JYMV01017770
176663
Gammaproteobacteria
GGG
Pro
>WENV170664562
JYMV01017769
176663
Gammaproteobacteria
GGG
Pro
>WENV170664626
JYMV01018370
178471
Gammaproteobacteria
GTT
Asn
>WENV170664627
JYMV01018370
178471
Gammaproteobacteria
GTT
Asn
>WENV170666434
JYMV01036919
178471
Gammaproteobacteria
GTT
Asn
>WENV170666435
JYMV01036919
178471
Gammaproteobacteria
GTT
Asn
>WENV170667284
JYMV01045595
178471
Gammaproteobacteria
GTT
Asn
>WENV170667285
JYMV01045595
178471
Gammaproteobacteria
GTT
Asn
>WENV170665377
JYMV01025391
313852
Gammaproteobacteria
TTC
Glu
>WENV170665376
JYMV01025390
313852
Gammaproteobacteria
TTC
Glu
>WENV170665364
JYMV01025316
313852
Gammaproteobacteria
TTC
Glu
>WENV170664117
JYMV01012968
313852
Gammaproteobacteria
TTC
Glu
>WENV170667432
JYMV01047396
178540
Gammaproteobacteria
TGG
Pro
>WENV170663566
JYMV01006949
480629
Gammaproteobacteria
GCA
Cys
>WENV170666870
JYMV01041623
178168
Gammaproteobacteria
ACG
Arg
>WENV170666725
JYMV01040121
178168
Gammaproteobacteria
ACG
Arg
>WENV170665763
JYMV01030031
178168
Gammaproteobacteria
ACG
Arg
>WENV170664878
JYMV01020564
178168
Gammaproteobacteria
ACG
Arg
>WENV170663447
JYMV01005704
178168
Gammaproteobacteria
ACG
Arg
>WENV170666942
JYMV01042270
480516
Gammaproteobacteria
GCA
Cys
>WENV170663774
JYMV01009222
480516
Gammaproteobacteria
GCA
Cys
>WENV170664443
JYMV01016285
338424
Gammaproteobacteria
TAC
Val
>WENV170664947
JYMV01021253
338424
Gammaproteobacteria
TAC
Val
>WENV170664950
JYMV01021253
243308
Gammaproteobacteria
TGG
Pro
>WENV170665268
JYMV01024087
243308
Gammaproteobacteria
TGG
Pro
>WENV170665450
JYMV01026402
56694
Gammaproteobacteria
GGA
Ser
>WENV170665248
JYMV01024036
197498
Gammaproteobacteria
TGG
Pro
>WENV170664944
JYMV01021253
176661
Gammaproteobacteria
GAC
Val
>WENV170667672
JYMV01050242
176661
Gammaproteobacteria
GAC
Val
>WENV170666138
JYMV01033768
140800
Gammaproteobacteria
GTA
Tyr
>WENV170666142
JYMV01033769
140800
Gammaproteobacteria
GTA
Tyr
>WENV170663375
JYMV01004942
176545
Gammaproteobacteria
CAT
Met
>WENV170663680
JYMV01008479
176545
Gammaproteobacteria
CAT
Met
>WENV170665449
JYMV01026402
312181
Gammaproteobacteria
TTT
Lys
>WENV170665448
JYMV01026402
312181
Gammaproteobacteria
TTT
Lys
>WENV170665447
JYMV01026402
312181
Gammaproteobacteria
TTT
Lys
>WENV170666712
JYMV01040054
401684
Gammaproteobacteria
CCT
Arg
>WENV170663299
JYMV01003958
401684
Gammaproteobacteria
CCT
Arg
>WENV170664441
JYMV01016285
281279
Gammaproteobacteria
TAC
Val
>WENV170664945
JYMV01021253
281279
Gammaproteobacteria
TAC
Val
>WENV170666715
JYMV01040054
232119
Gammaproteobacteria
ACG
Arg
>WENV170666714
JYMV01040054
232119
Gammaproteobacteria
ACG
Arg
>WENV170666220
JYMV01034655
74048
Gammaproteobacteria
CAA
Leu
>WENV170663956
JYMV01011098
74048
Gammaproteobacteria
CAA
Leu
>WENV170665983
JYMV01032107
481678
Gammaproteobacteria
GCA
Cys
>WENV170665862
JYMV01030975
481678
Gammaproteobacteria
GCA
Cys
>WENV170666941
JYMV01042270
306288
Gammaproteobacteria
GCC
Gly
>WENV170664820
JYMV01020194
306288
Gammaproteobacteria
GCC
Gly
>WENV170663773
JYMV01009222
306288
Gammaproteobacteria
GCC
Gly
>WENV170663771
JYMV01009222
306288
Gammaproteobacteria
GCC
Gly
>WENV170666739
JYMV01040319
176664
Gammaproteobacteria
CCT
Arg
>WENV170664377
JYMV01015775
176664
Gammaproteobacteria
CCT
Arg
>WENV170663418
JYMV01005380
178167
Gammaproteobacteria
TCT
Arg
>WENV170665927
JYMV01031553
178167
Gammaproteobacteria
TCT
Arg
>WENV170667568
JYMV01048991
178167
Gammaproteobacteria
TCT
Arg
>WENV170663250
JYMV01003398
346373
Gammaproteobacteria
GAA
Phe
>WENV170665665
JYMV01029113
346373
Gammaproteobacteria
GAA
Phe
>WENV170667890
JYMV01052744
176544
Gammaproteobacteria
CAT
Met
>WENV170667885
JYMV01052744
176544
Gammaproteobacteria
CAT
Met
>WENV170664402
JYMV01015962
176544
Gammaproteobacteria
CAT
Met
>WENV170664399
JYMV01015962
176544
Gammaproteobacteria
CAT
Met
>WENV170667833
JYMV01052058
118414
Gammaproteobacteria
TAG
Leu
>WENV170667125
JYMV01043822
118414
Gammaproteobacteria
TAG
Leu
>WENV170664483
JYMV01016842
118414
Gammaproteobacteria
TAG
Leu
>WENV170664107
JYMV01012911
118414
Gammaproteobacteria
TAG
Leu
>WENV170664813
JYMV01020133
281418
Gammaproteobacteria
TGC
Ala
>WENV170664405
JYMV01015962
180680
Gammaproteobacteria
GAC
Val
>WENV170663437
JYMV01005610
180680
Gammaproteobacteria
GAC
Val
>WENV170663239
JYMV01003336
180680
Gammaproteobacteria
GAC
Val
>WENV170664812
JYMV01020133
176301
Gammaproteobacteria
GAT
Ile
>WENV170667487
JYMV01048004
405482
Gammaproteobacteria
TTG
Gln
>WENV170666391
JYMV01036509
405482
Gammaproteobacteria
TTG
Gln
>WENV170664774
JYMV01019806
405482
Gammaproteobacteria
TTG
Gln
>WENV170664265
JYMV01014596
405482
Gammaproteobacteria
TTG
Gln
>WENV170663114
JYMV01002057
405482
Gammaproteobacteria
TTG
Gln
>WENV170665407
JYMV01025835
180678
Gammaproteobacteria
CCG
Arg
>WENV170667675
JYMV01050274
176665
Gammaproteobacteria
CGG
Pro
>WENV170665839
JYMV01030757
176665
Gammaproteobacteria
CGG
Pro
>WENV170664398
JYMV01015962
285547
Gammaproteobacteria
TTG
Gln
>WENV170664401
JYMV01015962
285547
Gammaproteobacteria
TTG
Gln
>WENV170664404
JYMV01015962
285547
Gammaproteobacteria
TTG
Gln
>WENV170667884
JYMV01052744
285547
Gammaproteobacteria
TTG
Gln
>WENV170667887
JYMV01052744
285547
Gammaproteobacteria
TTG
Gln
>WENV170667889
JYMV01052744
285547
Gammaproteobacteria
TTG
Gln
>WENV170667892
JYMV01052744
285547
Gammaproteobacteria
TTG
Gln
>WENV170664498
JYMV01016953
481314
Gammaproteobacteria
GCA
Cys
>WENV170667423
JYMV01047263
180681
Gammaproteobacteria
TGG
Pro
>WENV170667420
JYMV01047263
180681
Gammaproteobacteria
TGG
Pro
>WENV170667416
JYMV01047263
180681
Gammaproteobacteria
TGG
Pro
>WENV170664361
JYMV01015662
180681
Gammaproteobacteria
TGG
Pro
>WENV170664358
JYMV01015662
180681
Gammaproteobacteria
TGG
Pro
>WENV170664354
JYMV01015662
180681
Gammaproteobacteria
TGG
Pro
>WENV170666439
JYMV01036972
340790
Gammaproteobacteria
TGT
Thr
>WENV170665521
JYMV01027155
349758
Gammaproteobacteria
GGC
Ala
>WENV170665076
JYMV01022309
195896
Gammaproteobacteria
GTC
Asp
>WENV170664952
JYMV01021253
281283
Gammaproteobacteria
GTG
His
>WENV170665270
JYMV01024087
281283
Gammaproteobacteria
GTG
His
>WENV170663707
JYMV01008665
300318
Gammaproteobacteria
GGC
Ala
>WENV170667891
JYMV01052744
118640
Gammaproteobacteria
TAG
Leu
>WENV170664357
JYMV01015662
118640
Gammaproteobacteria
TAG
Leu
>WENV170664360
JYMV01015662
118640
Gammaproteobacteria
TAG
Leu
>WENV170664400
JYMV01015962
118640
Gammaproteobacteria
TAG
Leu
>WENV170664403
JYMV01015962
118640
Gammaproteobacteria
TAG
Leu
>WENV170667419
JYMV01047263
118640
Gammaproteobacteria
TAG
Leu
>WENV170667422
JYMV01047263
118640
Gammaproteobacteria
TAG
Leu
>WENV170667886
JYMV01052744
118640
Gammaproteobacteria
TAG
Leu
>WENV170667888
JYMV01052744
118640
Gammaproteobacteria
TAG
Leu
>WENV170667313
JYMV01045805
180679
Gammaproteobacteria
CCA
Trp
>WENV170666716
JYMV01040054
180679
Gammaproteobacteria
CCA
Trp
>WENV170666341
JYMV01035994
180679
Gammaproteobacteria
CCA
Trp
>WENV170665854
JYMV01030868
180679
Gammaproteobacteria
CCA
Trp
>WENV170663057
JYMV01001278
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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