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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170696895
LGVF01059415
20552
Gammaproteobacteria
GCT
Ser
>WENV170699910
LGVF01680041
118218
Gammaproteobacteria
TAG
Leu
>WENV170699973
LGVF01693850
178777
Gammaproteobacteria
CCG
Arg
>WENV170699930
LGVF01681669
284693
Gammaproteobacteria
TTC
Glu
>WENV170696216
LGVF01003674
357066
Gammaproteobacteria
TGC
Ala
>WENV170696797
LGVF01050199
357066
Gammaproteobacteria
TGC
Ala
>WENV170699917
LGVF01680271
444310
Gammaproteobacteria
TTG
Gln
>WENV170699945
LGVF01684496
190706
Gammaproteobacteria
ACG
Arg
>WENV170699942
LGVF01683175
178535
Gammaproteobacteria
CCT
Arg
>WENV170699943
LGVF01683336
20410
Gammaproteobacteria
TGA
Ser
>WENV170699920
LGVF01680600
178540
Gammaproteobacteria
TGG
Pro
>WENV170699965
LGVF01691784
73498
Gammaproteobacteria
CAA
Leu
>WENV170698230
LGVF01291435
178168
Gammaproteobacteria
ACG
Arg
>WENV170699152
LGVF01489691
443066
Gammaproteobacteria
GGT
Thr
>WENV170699904
LGVF01679258
508107
Gammaproteobacteria
GCA
Cys
>WENV170698159
LGVF01274937
135293
Gammaproteobacteria
GTA
Tyr
>WENV170699533
LGVF01577056
289482
Gammaproteobacteria
TTT
Lys
>WENV170699019
LGVF01462463
180718
Gammaproteobacteria
CAT
Met
>WENV170698714
LGVF01399712
370389
Gammaproteobacteria
GGC
Ala
>WENV170696937
LGVF01062589
281418
Gammaproteobacteria
TGC
Ala
>WENV170696262
LGVF01008371
281418
Gammaproteobacteria
TGC
Ala
>WENV170696226
LGVF01004498
281418
Gammaproteobacteria
TGC
Ala
>WENV170697529
LGVF01151550
281418
Gammaproteobacteria
TGC
Ala
>WENV170698336
LGVF01315335
176301
Gammaproteobacteria
GAT
Ile
>WENV170697528
LGVF01151550
176301
Gammaproteobacteria
GAT
Ile
>WENV170696936
LGVF01062589
176301
Gammaproteobacteria
GAT
Ile
>WENV170696261
LGVF01008371
176301
Gammaproteobacteria
GAT
Ile
>WENV170696259
LGVF01008062
176301
Gammaproteobacteria
GAT
Ile
>WENV170696225
LGVF01004498
176301
Gammaproteobacteria
GAT
Ile
>WENV170699957
LGVF01687953
89769
Gammaproteobacteria
CAG
Leu
>WENV170699947
LGVF01685299
371341
Gammaproteobacteria
GTT
Asn
>WENV170698294
LGVF01307665
230011
Gammaproteobacteria
ACG
Arg
>WENV170699944
LGVF01684496
8667
Gammaproteobacteria
GCT
Ser
>WENV170696803
LGVF01051103
201377
Gammaproteobacteria
TGG
Pro
>WENV170699959
LGVF01688863
140861
Gammaproteobacteria
GTA
Tyr
>WENV170699465
LGVF01559051
400917
Gammaproteobacteria
TTG
Gln
>WENV170699923
LGVF01680831
184457
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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