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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180040588
LLBZ010002020
282942
Betaproteobacteria
CCG
Arg
>WENV180040671
LLBZ010005673
316525
Betaproteobacteria
TGT
Thr
>WENV180040685
LLBZ010006586
118123
Betaproteobacteria
CAG
Leu
>WENV180040696
LLBZ010007220
342564
Betaproteobacteria
CGC
Ala
>WENV180040736
LLBZ010009814
200194
Betaproteobacteria
TTG
Gln
>WENV180040974
LLBZ010030759
188039
Betaproteobacteria
TCT
Arg
>WENV180041154
LLBZ010053621
281681
Betaproteobacteria
TTT
Lys
>WENV180041181
LLBZ010059166
480929
Betaproteobacteria
GCA
Cys
>WENV180041191
LLBZ010061905
333120
Betaproteobacteria
CCA
Trp
>WENV180041386
LLBZ010115686
496730
Betaproteobacteria
GCA
Cys
>WENV180041390
LLBZ010117231
178141
Betaproteobacteria
CAT
Met
>WENV180041393
LLBZ010119180
88494
Betaproteobacteria
CAG
Leu
>WENV180041485
LLBZ010155706
5917
Betaproteobacteria
GCT
Ser
>WENV180041682
LLBZ010297224
283006
Betaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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