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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180083245
MPMD02031582
284706
Gammaproteobacteria
GTT
Asn
>WENV180084569
MPMD02211178
74766
Gammaproteobacteria
CAG
Leu
>WENV180084560
MPMD02210479
483085
Gammaproteobacteria
GCA
Cys
>WENV180085623
MPMD02351619
483085
Gammaproteobacteria
GCA
Cys
>WENV180086549
MPMD02482594
178168
Gammaproteobacteria
ACG
Arg
>WENV180083008
MPMD02002617
57340
Gammaproteobacteria
GGA
Ser
>WENV180085679
MPMD02357819
178841
Gammaproteobacteria
GTC
Asp
>WENV180083377
MPMD02050422
117774
Gammaproteobacteria
GAG
Leu
>WENV180084942
MPMD02261254
182374
Gammaproteobacteria
CAT
Met
>WENV180085091
MPMD02280187
185695
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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