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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965544
MTEU01003992
487002
Gammaproteobacteria
GCA
Cys
>WENV170965266
MTEU01000088
330651
Gammaproteobacteria
TGT
Thr
>WENV170965399
MTEU01001995
178539
Gammaproteobacteria
GAC
Val
>WENV170965545
MTEU01003992
73781
Gammaproteobacteria
TAA
Leu
>WENV170965437
MTEU01002377
399050
Gammaproteobacteria
CCT
Arg
>WENV170965551
MTEU01004076
399050
Gammaproteobacteria
CCT
Arg
>WENV170965639
MTEU01005187
197233
Gammaproteobacteria
CAT
Met
>WENV170965494
MTEU01003290
285363
Gammaproteobacteria
TGT
Thr
>WENV170965667
MTEU01005686
176520
Gammaproteobacteria
CAT
Met
>WENV170965466
MTEU01002934
284693
Gammaproteobacteria
TTC
Glu
>WENV170965484
MTEU01003094
284693
Gammaproteobacteria
TTC
Glu
>WENV170965486
MTEU01003094
284693
Gammaproteobacteria
TTC
Glu
>WENV170965630
MTEU01005108
284693
Gammaproteobacteria
TTC
Glu
>WENV170965296
MTEU01000364
280882
Gammaproteobacteria
GTG
His
>WENV170965350
MTEU01000978
280882
Gammaproteobacteria
GTG
His
>WENV170965493
MTEU01003290
444310
Gammaproteobacteria
TTG
Gln
>WENV170965355
MTEU01001088
282550
Gammaproteobacteria
TAC
Val
>WENV170965491
MTEU01003255
176627
Gammaproteobacteria
CCG
Arg
>WENV170965633
MTEU01005137
480881
Gammaproteobacteria
CCC
Gly
>WENV170965305
MTEU01000448
74339
Gammaproteobacteria
GAG
Leu
>WENV170965445
MTEU01002590
63595
Gammaproteobacteria
TGA
Ser
>WENV170965606
MTEU01004866
73827
Gammaproteobacteria
CAG
Leu
>WENV170965505
MTEU01003430
56108
Gammaproteobacteria
TGA
Ser
>WENV170965632
MTEU01005108
56340
Gammaproteobacteria
GGA
Ser
>WENV170965457
MTEU01002665
280876
Gammaproteobacteria
GGT
Thr
>WENV170965559
MTEU01004189
176244
Gammaproteobacteria
TGG
Pro
>WENV170965661
MTEU01005582
176244
Gammaproteobacteria
TGG
Pro
>WENV170965280
MTEU01000270
176241
Gammaproteobacteria
CGG
Pro
>WENV170965386
MTEU01001809
176241
Gammaproteobacteria
CGG
Pro
>WENV170965275
MTEU01000226
118322
Gammaproteobacteria
TAA
Leu
>WENV170965477
MTEU01003078
242775
Gammaproteobacteria
TGG
Pro
>WENV170965513
MTEU01003525
20472
Gammaproteobacteria
GCT
Ser
>WENV170965552
MTEU01004083
29777
Gammaproteobacteria
GGA
Ser
>WENV170965470
MTEU01002984
178550
Gammaproteobacteria
ACG
Arg
>WENV170965531
MTEU01003740
178550
Gammaproteobacteria
ACG
Arg
>WENV170965272
MTEU01000196
236619
Gammaproteobacteria
GTC
Asp
>WENV170965511
MTEU01003484
228290
Gammaproteobacteria
CCG
Arg
>WENV170965443
MTEU01002510
117930
Gammaproteobacteria
CAA
Leu
>WENV170965601
MTEU01004723
179074
Gammaproteobacteria
CCT
Arg
>WENV170965460
MTEU01002677
118321
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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