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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180116355
OAQU01000042
57121
Bacillota
GGA
Ser
>WENV180116341
OAQU01000023
400904
Bacillota
CCT
Arg
>WENV180116356
OAQU01000046
400904
Bacillota
CCT
Arg
>WENV180116391
OAQU01000218
13634
Bacillota
CGA
Ser
>WENV180116426
OAQU01002585
29930
Bacillota
GGA
Ser
>WENV180116373
OAQU01000097
179563
Bacillota
GAT
Ile
>WENV180116397
OAQU01000220
179563
Bacillota
GAT
Ile
>WENV180116370
OAQU01000097
184171
Bacillota
CAT
Met
>WENV180116407
OAQU01000346
13376
Bacillota
CGA
Ser
>WENV180116365
OAQU01000097
179130
Bacillota
ACG
Arg
>WENV180116419
OAQU01000984
284389
Bacillota
CTT
Lys
>WENV180116429
OAQU01002735
319100
Bacillota
GTG
His
>WENV180116390
OAQU01000218
74725
Bacillota
CAG
Leu
>WENV180116417
OAQU01000644
284390
Bacillota
CGT
Thr
>WENV180116376
OAQU01000099
480366
Bacillota
GGT
Thr
>WENV180116364
OAQU01000097
47847
Bacillota
TAA
Leu
>WENV180116394
OAQU01000220
284680
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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