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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180284149
OBID01017894
399055
Bacillota
TTG
Gln
>WENV180284646
OBID01076944
399055
Bacillota
TTG
Gln
>WENV180285067
OBID01213768
306648
Bacillota
GTT
Asn
>WENV180285441
OBID01426339
176033
Bacillota
CAT
Met
>WENV180285591
OBID01549296
280428
Bacillota
GAA
Phe
>WENV180284156
OBID01018151
402928
Bacillota
GCC
Gly
>WENV180284251
OBID01023422
120110
Bacillota
TAG
Leu
>WENV180285981
OBID01876420
179917
Bacillota
CAT
Met
>WENV180284160
OBID01018341
280492
Bacillota
CTT
Lys
>WENV180284779
OBID01112702
302227
Bacillota
TAC
Val
>WENV180284026
OBID01011512
236579
Bacillota
GAT
Ile
>WENV180284961
OBID01175146
184497
Bacillota
GGG
Pro
>WENV180284388
OBID01037329
179563
Bacillota
GAT
Ile
>WENV180285352
OBID01349275
280447
Bacillota
GAC
Val
>WENV180285200
OBID01273084
175825
Bacillota
GAT
Ile
>WENV180283635
OBID01001180
280427
Bacillota
TAC
Val
>WENV180283594
OBID01000948
280427
Bacillota
TAC
Val
>WENV180284832
OBID01130591
46830
Bacillota
TAA
Leu
>WENV180285088
OBID01219976
481217
Bacillota
GCA
Cys
>WENV180284647
OBID01076944
481156
Bacillota
GCA
Cys
>WENV180285199
OBID01273084
280436
Bacillota
TGC
Ala
>WENV180284083
OBID01015203
290485
Bacillota
TTT
Lys
>WENV180284352
OBID01033230
290325
Bacillota
GCC
Gly
>WENV180283596
OBID01000948
290325
Bacillota
GCC
Gly
>WENV180285184
OBID01265444
175831
Bacillota
ACG
Arg
>WENV180284833
OBID01130591
179130
Bacillota
ACG
Arg
>WENV180285643
OBID01590538
176015
Bacillota
TGG
Pro
>WENV180285692
OBID01626725
346451
Bacillota
TTT
Lys
>WENV180283450
OBID01000117
184121
Bacillota
TGG
Pro
>WENV180283455
OBID01000118
484885
Bacillota
TCC
Gly
>WENV180285520
OBID01488869
480322
Bacillota
CTG
Gln
>WENV180285840
OBID01751607
287380
Bacillota
CTT
Lys
>WENV180284241
OBID01022461
322848
Bacillota
CTT
Lys
>WENV180284240
OBID01022461
398854
Bacillota
CTC
Glu
>WENV180285570
OBID01534153
291576
Bacillota
CCC
Gly
>WENV180284691
OBID01089694
480324
Bacillota
TTG
Gln
>WENV180285850
OBID01762043
56079
Bacillota
AAG
Leu
>WENV180285984
OBID01876802
280444
Bacillota
GGT
Thr
>WENV180283858
OBID01004571
117763
Bacillota
CAG
Leu
>WENV180284493
OBID01048901
35195
Bacillota
GCT
Ser
>WENV180284100
OBID01015203
302004
Bacillota
TAC
Val
>WENV180284144
OBID01017670
321753
Bacillota
GCC
Gly
>WENV180285395
OBID01384163
280866
Bacillota
TTT
Lys
>WENV180286049
OBID01945401
175915
Bacillota
GTC
Asp
>WENV180284255
OBID01023422
180064
Bacillota
ACG
Arg
>WENV180283499
OBID01000332
398920
Bacillota
CCG
Arg
>WENV180284822
OBID01127175
398852
Bacillota
CTC
Glu
>WENV180283547
OBID01000599
280650
Bacillota
CTT
Lys
>WENV180285841
OBID01752296
482441
Bacillota
TCC
Gly
>WENV180283974
OBID01008335
280483
Bacillota
GAA
Phe
>WENV180284686
OBID01086662
175857
Bacillota
GTG
His
>WENV180284966
OBID01176510
175849
Bacillota
GTC
Asp
>WENV180284092
OBID01015203
176319
Bacillota
CAT
Met
>WENV180284406
OBID01038035
280486
Bacillota
TGC
Ala
>WENV180285651
OBID01594966
56074
Bacillota
TGA
Ser
>WENV180285290
OBID01316592
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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