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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180297034
OBJA01007973
282712
Bacteroidota
TTT
Lys
>WENV180298122
OBJA01178387
322882
Bacteroidota
GCC
Gly
>WENV180296459
OBJA01000574
203954
Bacteroidota
GTC
Asp
>WENV180296817
OBJA01003119
203954
Bacteroidota
GTC
Asp
>WENV180297029
OBJA01007937
209351
Bacteroidota
CAT
Met
>WENV180298590
OBJA01458509
100504
Bacteroidota
GTA
Tyr
>WENV180298296
OBJA01260121
176602
Bacteroidota
TGC
Ala
>WENV180297395
OBJA01028265
176602
Bacteroidota
TGC
Ala
>WENV180296855
OBJA01003856
156753
Bacteroidota
TAC
Val
>WENV180296747
OBJA01002250
197494
Bacteroidota
GTC
Asp
>WENV180296214
OBJA01000081
179905
Bacteroidota
GTT
Asn
>WENV180297950
OBJA01120905
227539
Bacteroidota
GTT
Asn
>WENV180298662
OBJA01510699
304112
Bacteroidota
GAA
Phe
>WENV180296939
OBJA01005896
299032
Bacteroidota
GCC
Gly
>WENV180296755
OBJA01002341
299032
Bacteroidota
GCC
Gly
>WENV180296753
OBJA01002341
299032
Bacteroidota
GCC
Gly
>WENV180296488
OBJA01000656
180199
Bacteroidota
CAT
Met
>WENV180296216
OBJA01000083
180199
Bacteroidota
CAT
Met
>WENV180297382
OBJA01026890
280478
Bacteroidota
GCC
Gly
>WENV180297287
OBJA01019987
20766
Bacteroidota
GGA
Ser
>WENV180297598
OBJA01049049
186108
Bacteroidota
GTT
Asn
>WENV180296731
OBJA01002103
186108
Bacteroidota
GTT
Asn
>WENV180296549
OBJA01000835
186108
Bacteroidota
GTT
Asn
>WENV180298747
OBJA01581087
107227
Bacteroidota
GTA
Tyr
>WENV180297715
OBJA01068471
179374
Bacteroidota
TGG
Pro
>WENV180296749
OBJA01002314
73011
Bacteroidota
CAA
Leu
>WENV180298454
OBJA01352977
436346
Bacteroidota
GGT
Thr
>WENV180296870
OBJA01004004
319120
Bacteroidota
CAT
Met
>WENV180297385
OBJA01027142
319120
Bacteroidota
CAT
Met
>WENV180296644
OBJA01001494
295349
Bacteroidota
CCA
Trp
>WENV180296177
OBJA01000030
295349
Bacteroidota
CCA
Trp
>WENV180296791
OBJA01002704
188555
Bacteroidota
CAT
Met
>WENV180297616
OBJA01052172
281207
Bacteroidota
GAA
Phe
>WENV180298269
OBJA01244528
284068
Bacteroidota
TTT
Lys
>WENV180296752
OBJA01002326
156405
Bacteroidota
TAC
Val
>WENV180296887
OBJA01004248
416636
Bacteroidota
TTC
Glu
>WENV180298591
OBJA01458509
284494
Bacteroidota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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