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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180360968
OBNU01072633
56121
Actinomycetota
GGA
Ser
>WENV180360720
OBNU01014894
501346
Actinomycetota
CCC
Gly
>WENV180360460
OBNU01000035
291869
Actinomycetota
TGC
Ala
>WENV180360779
OBNU01024118
480591
Actinomycetota
CCC
Gly
>WENV180360933
OBNU01063827
298505
Actinomycetota
CTC
Glu
>WENV180360491
OBNU01000206
342006
Actinomycetota
GCC
Gly
>WENV180360659
OBNU01008085
399483
Actinomycetota
CTG
Gln
>WENV180360492
OBNU01000206
498750
Actinomycetota
GCA
Cys
>WENV180360570
OBNU01002055
209510
Actinomycetota
GAT
Ile
>WENV180360528
OBNU01000687
281661
Actinomycetota
TAC
Val
>WENV180360493
OBNU01000206
423412
Actinomycetota
GAC
Val
>WENV180360459
OBNU01000035
223227
Actinomycetota
GAT
Ile
>WENV180360823
OBNU01031711
351981
Actinomycetota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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