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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180593803
OCOY01000016
398995
Alphaproteobacteria
CAC
Val
>WENV180593801
OCOY01000013
399001
Alphaproteobacteria
GAC
Val
>WENV180593818
OCOY01000040
282663
Alphaproteobacteria
CAT
Met
>WENV180593946
OCOY01005192
400930
Alphaproteobacteria
GAA
Phe
>WENV180593910
OCOY01002928
404592
Alphaproteobacteria
GGT
Thr
>WENV180593915
OCOY01003262
187024
Alphaproteobacteria
TCT
Arg
>WENV180594105
OCOY01039186
178725
Alphaproteobacteria
GTG
His
>WENV180594016
OCOY01010804
100353
Alphaproteobacteria
GTA
Tyr
>WENV180593855
OCOY01000705
281659
Alphaproteobacteria
TGC
Ala
>WENV180594072
OCOY01026900
281659
Alphaproteobacteria
TGC
Ala
>WENV180594076
OCOY01027532
281659
Alphaproteobacteria
TGC
Ala
>WENV180593918
OCOY01003526
178339
Alphaproteobacteria
CCG
Arg
>WENV180593863
OCOY01000956
118235
Alphaproteobacteria
TAG
Leu
>WENV180594092
OCOY01034669
180029
Alphaproteobacteria
CAT
Met
>WENV180593969
OCOY01007333
179941
Alphaproteobacteria
CAT
Met
>WENV180594079
OCOY01028491
184517
Alphaproteobacteria
GGG
Pro
>WENV180593802
OCOY01000015
117796
Alphaproteobacteria
TAG
Leu
>WENV180594069
OCOY01024993
141247
Alphaproteobacteria
CAA
Leu
>WENV180593799
OCOY01000008
398999
Alphaproteobacteria
GGT
Thr
>WENV180593866
OCOY01001198
404744
Alphaproteobacteria
GCC
Gly
>WENV180593889
OCOY01002184
100184
Alphaproteobacteria
CAG
Leu
>WENV180593988
OCOY01008441
177988
Alphaproteobacteria
ACG
Arg
>WENV180594051
OCOY01020999
118213
Alphaproteobacteria
TAG
Leu
>WENV180593816
OCOY01000036
398994
Alphaproteobacteria
GTT
Asn
>WENV180593996
OCOY01009369
480900
Alphaproteobacteria
GCA
Cys
>WENV180593797
OCOY01000005
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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