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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
140 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180816472
ODJP01016435
200563
Bacillota
TGG
Pro
>WENV180816573
ODJP01025673
288834
Bacillota
TAC
Val
>WENV180816936
ODJP01125546
283303
Bacillota
GTC
Asp
>WENV180816849
ODJP01075457
212982
Bacillota
ACG
Arg
>WENV180816889
ODJP01094959
280500
Bacillota
TGC
Ala
>WENV180816913
ODJP01115802
280500
Bacillota
TGC
Ala
>WENV180816926
ODJP01122368
280500
Bacillota
TGC
Ala
>WENV180816940
ODJP01126216
280500
Bacillota
TGC
Ala
>WENV180815981
ODJP01003082
289121
Bacillota
CCA
Trp
>WENV180816359
ODJP01010753
184537
Bacillota
ACG
Arg
>WENV180815168
ODJP01000045
221826
Bacillota
ACG
Arg
>WENV180816784
ODJP01059758
408526
Bacillota
GCA
Cys
>WENV180816586
ODJP01026665
296855
Bacillota
GGT
Thr
>WENV180815980
ODJP01003082
287508
Bacillota
GTG
His
>WENV180816577
ODJP01025928
48505
Bacillota
TGA
Ser
>WENV180816399
ODJP01012293
48505
Bacillota
TGA
Ser
>WENV180815387
ODJP01000280
183994
Bacillota
TCT
Arg
>WENV180816070
ODJP01004091
231532
Bacillota
ACG
Arg
>WENV180816044
ODJP01003781
289717
Bacillota
CTT
Lys
>WENV180815905
ODJP01002638
289717
Bacillota
CTT
Lys
>WENV180816315
ODJP01008945
289717
Bacillota
CTT
Lys
>WENV180816251
ODJP01006792
459011
Bacillota
TGT
Thr
>WENV180816811
ODJP01063880
405874
Bacillota
TTC
Glu
>WENV180816635
ODJP01033851
20932
Bacillota
GCT
Ser
>WENV180815294
ODJP01000171
20932
Bacillota
GCT
Ser
>WENV180815928
ODJP01002744
20932
Bacillota
GCT
Ser
>WENV180816894
ODJP01099017
291553
Bacillota
GAA
Phe
>WENV180816782
ODJP01059758
291553
Bacillota
GAA
Phe
>WENV180816690
ODJP01040812
295166
Bacillota
TGC
Ala
>WENV180816153
ODJP01005104
482593
Bacillota
CCC
Gly
>WENV180816391
ODJP01011828
176014
Bacillota
TCT
Arg
>WENV180816891
ODJP01098204
339995
Bacillota
TGC
Ala
>WENV180816698
ODJP01042293
339995
Bacillota
TGC
Ala
>WENV180816684
ODJP01039909
339995
Bacillota
TGC
Ala
>WENV180815479
ODJP01000514
20942
Bacillota
GGA
Ser
>WENV180815477
ODJP01000507
20942
Bacillota
GGA
Ser
>WENV180815670
ODJP01001116
409321
Bacillota
TTC
Glu
>WENV180815725
ODJP01001379
100696
Bacillota
GTA
Tyr
>WENV180815512
ODJP01000592
100696
Bacillota
GTA
Tyr
>WENV180815727
ODJP01001379
100696
Bacillota
GTA
Tyr
>WENV180816812
ODJP01063880
287643
Bacillota
TAC
Val
>WENV180816647
ODJP01034608
287643
Bacillota
TAC
Val
>WENV180816766
ODJP01053983
284723
Bacillota
TAC
Val
>WENV180816802
ODJP01061684
452735
Bacillota
GCC
Gly
>WENV180816366
ODJP01011063
452735
Bacillota
GCC
Gly
>WENV180816193
ODJP01005865
452735
Bacillota
GCC
Gly
>WENV180815239
ODJP01000108
452735
Bacillota
GCC
Gly
>WENV180815728
ODJP01001379
187458
Bacillota
CAT
Met
>WENV180815513
ODJP01000592
187458
Bacillota
CAT
Met
>WENV180816266
ODJP01007167
338033
Bacillota
GAA
Phe
>WENV180815672
ODJP01001116
338033
Bacillota
GAA
Phe
>WENV180815090
ODJP01000011
453914
Bacillota
GTT
Asn
>WENV180815964
ODJP01002947
183993
Bacillota
CAT
Met
>WENV180815726
ODJP01001379
356355
Bacillota
CAT
Met
>WENV180815724
ODJP01001379
356355
Bacillota
CAT
Met
>WENV180815963
ODJP01002947
289149
Bacillota
GGT
Thr
>WENV180816587
ODJP01026665
184495
Bacillota
CAT
Met
>WENV180815421
ODJP01000358
141202
Bacillota
CAA
Leu
>WENV180815720
ODJP01001317
47166
Bacillota
CGA
Ser
>WENV180815813
ODJP01001856
402739
Bacillota
CCG
Arg
>WENV180816937
ODJP01126044
289147
Bacillota
GTT
Asn
>WENV180816685
ODJP01040045
400041
Bacillota
CCG
Arg
>WENV180816250
ODJP01006792
195133
Bacillota
GTC
Asp
>WENV180816944
ODJP01127454
195133
Bacillota
GTC
Asp
>WENV180815858
ODJP01002183
183957
Bacillota
CCT
Arg
>WENV180816496
ODJP01018238
156730
Bacillota
ACG
Arg
>WENV180816134
ODJP01004926
293309
Bacillota
GTT
Asn
>WENV180816583
ODJP01026665
289713
Bacillota
TGT
Thr
>WENV180815760
ODJP01001565
404091
Bacillota
TTG
Gln
>WENV180816272
ODJP01007167
110240
Bacillota
GAG
Leu
>WENV180816270
ODJP01007167
110240
Bacillota
GAG
Leu
>WENV180816632
ODJP01033204
187364
Bacillota
CAT
Met
>WENV180815759
ODJP01001565
289716
Bacillota
GTG
His
>WENV180816847
ODJP01075457
455891
Bacillota
GCC
Gly
>WENV180816174
ODJP01005441
287380
Bacillota
CTT
Lys
>WENV180816646
ODJP01034608
287380
Bacillota
CTT
Lys
>WENV180815171
ODJP01000049
508151
Bacillota
GGT
Thr
>WENV180816911
ODJP01115206
332891
Bacillota
TGC
Ala
>WENV180815344
ODJP01000231
323864
Bacillota
TGC
Ala
>WENV180816833
ODJP01071444
432453
Bacillota
TTC
Glu
>WENV180816814
ODJP01065181
432453
Bacillota
TTC
Glu
>WENV180816769
ODJP01054775
432453
Bacillota
TTC
Glu
>WENV180816501
ODJP01018925
432453
Bacillota
TTC
Glu
>WENV180816163
ODJP01005231
432453
Bacillota
TTC
Glu
>WENV180816135
ODJP01004926
432453
Bacillota
TTC
Glu
>WENV180816063
ODJP01004008
432453
Bacillota
TTC
Glu
>WENV180815487
ODJP01000530
480337
Bacillota
TCC
Gly
>WENV180816575
ODJP01025673
301649
Bacillota
TTT
Lys
>WENV180816648
ODJP01034608
179935
Bacillota
GTC
Asp
>WENV180815671
ODJP01001116
179935
Bacillota
GTC
Asp
>WENV180815898
ODJP01002585
119459
Bacillota
TAG
Leu
>WENV180815840
ODJP01002035
119459
Bacillota
TAG
Leu
>WENV180816649
ODJP01034800
104114
Bacillota
CAG
Leu
>WENV180816500
ODJP01018925
333281
Bacillota
GTT
Asn
>WENV180815643
ODJP01000976
333281
Bacillota
GTT
Asn
>WENV180816781
ODJP01059758
280547
Bacillota
GTC
Asp
>WENV180816540
ODJP01022243
280547
Bacillota
GTC
Asp
>WENV180816816
ODJP01065181
445407
Bacillota
GCC
Gly
>WENV180816783
ODJP01059758
445407
Bacillota
GCC
Gly
>WENV180816771
ODJP01054775
445407
Bacillota
GCC
Gly
>WENV180816165
ODJP01005324
445407
Bacillota
GCC
Gly
>WENV180815959
ODJP01002929
445407
Bacillota
GCC
Gly
>WENV180816912
ODJP01115253
289154
Bacillota
CTT
Lys
>WENV180815243
ODJP01000108
289154
Bacillota
CTT
Lys
>WENV180816832
ODJP01071444
289761
Bacillota
TTT
Lys
>WENV180816768
ODJP01054775
289761
Bacillota
TTT
Lys
>WENV180815761
ODJP01001565
289761
Bacillota
TTT
Lys
>WENV180815989
ODJP01003147
403759
Bacillota
CTC
Glu
>WENV180815988
ODJP01003147
403759
Bacillota
CTC
Glu
>WENV180816657
ODJP01036185
283367
Bacillota
GCC
Gly
>WENV180816652
ODJP01035263
283367
Bacillota
GCC
Gly
>WENV180816389
ODJP01011801
283367
Bacillota
GCC
Gly
>WENV180815361
ODJP01000256
283367
Bacillota
GCC
Gly
>WENV180815893
ODJP01002528
52748
Bacillota
TGA
Ser
>WENV180815092
ODJP01000011
280561
Bacillota
CAT
Met
>WENV180816834
ODJP01071444
289715
Bacillota
TAC
Val
>WENV180816815
ODJP01065181
289715
Bacillota
TAC
Val
>WENV180816770
ODJP01054775
289715
Bacillota
TAC
Val
>WENV180816502
ODJP01018925
289715
Bacillota
TAC
Val
>WENV180816164
ODJP01005231
289715
Bacillota
TAC
Val
>WENV180816136
ODJP01004926
289715
Bacillota
TAC
Val
>WENV180816064
ODJP01004008
289715
Bacillota
TAC
Val
>WENV180816949
ODJP01129086
20943
Bacillota
CGA
Ser
>WENV180816517
ODJP01019514
20943
Bacillota
CGA
Ser
>WENV180815485
ODJP01000530
20943
Bacillota
CGA
Ser
>WENV180816212
ODJP01006378
141141
Bacillota
GTA
Tyr
>WENV180816789
ODJP01060283
118370
Bacillota
TAG
Leu
>WENV180815069
ODJP01000002
444984
Bacillota
GCC
Gly
>WENV180815486
ODJP01000530
208539
Bacillota
TGG
Pro
>WENV180815385
ODJP01000280
208539
Bacillota
TGG
Pro
>WENV180815488
ODJP01000530
184539
Bacillota
TCT
Arg
>WENV180815775
ODJP01001629
183995
Bacillota
GGG
Pro
>WENV180816271
ODJP01007167
100945
Bacillota
CAG
Leu
>WENV180815218
ODJP01000087
403766
Bacillota
TTG
Gln
>WENV180815240
ODJP01000108
489283
Bacillota
GCA
Cys
>WENV180816823
ODJP01066579
280486
Bacillota
TGC
Ala
>WENV180816383
ODJP01011770
280486
Bacillota
TGC
Ala
>WENV180816643
ODJP01034608
289124
Bacillota
GTT
Asn
>WENV180816151
ODJP01005092
289124
Bacillota
GTT
Asn
>WENV180816378
ODJP01011620
482078
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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