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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181368280
OFQL01000112
212101
Betaproteobacteria
GAT
Ile
>WENV181368267
OFQL01000056
284938
Betaproteobacteria
TTT
Lys
>WENV181368301
OFQL01000295
328243
Betaproteobacteria
CCG
Arg
>WENV181368353
OFQL01001069
180112
Betaproteobacteria
TGG
Pro
>WENV181368256
OFQL01000024
283006
Betaproteobacteria
GCC
Gly
>WENV181368291
OFQL01000205
178217
Betaproteobacteria
TTG
Gln
>WENV181368337
OFQL01000825
282942
Betaproteobacteria
CCG
Arg
>WENV181368325
OFQL01000719
180113
Betaproteobacteria
TCT
Arg
>WENV181368377
OFQL01001605
89684
Betaproteobacteria
TAG
Leu
>WENV181368375
OFQL01001493
499230
Betaproteobacteria
TCC
Gly
>WENV181368265
OFQL01000040
120253
Betaproteobacteria
CAG
Leu
>WENV181368439
OFQL01005048
180114
Betaproteobacteria
CAT
Met
>WENV181368550
OFQL01021808
229876
Betaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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