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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181399795
OFSE01076067
401484
Actinomycetota
GCC
Gly
>WENV181399506
OFSE01038097
119438
Actinomycetota
GTA
Tyr
>WENV181399794
OFSE01075829
407367
Actinomycetota
TGT
Thr
>WENV181399418
OFSE01030643
289635
Actinomycetota
TTC
Glu
>WENV181399366
OFSE01026157
481421
Actinomycetota
TCC
Gly
>WENV181399808
OFSE01078036
287577
Actinomycetota
GCC
Gly
>WENV181398925
OFSE01004207
184461
Actinomycetota
CCA
Trp
>WENV181399461
OFSE01033699
407330
Actinomycetota
CCG
Arg
>WENV181399431
OFSE01031726
13663
Actinomycetota
GCT
Ser
>WENV181399722
OFSE01061459
101026
Actinomycetota
TGA
Ser
>WENV181399479
OFSE01035676
184462
Actinomycetota
CAT
Met
>WENV181399748
OFSE01066132
294834
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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