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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
138 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181508497
OGGQ01000676
510477
Bacillota
TCC
Gly
>WENV181509602
OGGQ01007225
405363
Bacillota
GCA
Cys
>WENV181508284
OGGQ01000304
290391
Bacillota
TAC
Val
>WENV181508982
OGGQ01002187
290391
Bacillota
TAC
Val
>WENV181508471
OGGQ01000630
221826
Bacillota
ACG
Arg
>WENV181510136
OGGQ01035419
141454
Bacillota
TAG
Leu
>WENV181509009
OGGQ01002302
302145
Bacillota
GAA
Phe
>WENV181510138
OGGQ01035419
280642
Bacillota
TTG
Gln
>WENV181509862
OGGQ01014435
175842
Bacillota
CAC
Val
>WENV181510139
OGGQ01035419
280639
Bacillota
TTT
Lys
>WENV181508678
OGGQ01001140
291629
Bacillota
CCA
Trp
>WENV181508893
OGGQ01001806
287289
Bacillota
GCC
Gly
>WENV181509510
OGGQ01005979
184497
Bacillota
GGG
Pro
>WENV181508589
OGGQ01000873
184497
Bacillota
GGG
Pro
>WENV181510142
OGGQ01035419
176018
Bacillota
CAT
Met
>WENV181508101
OGGQ01000092
179176
Bacillota
ACG
Arg
>WENV181509172
OGGQ01003027
215243
Bacillota
CAT
Met
>WENV181509295
OGGQ01003775
215243
Bacillota
CAT
Met
>WENV181509652
OGGQ01008301
215243
Bacillota
CAT
Met
>WENV181510137
OGGQ01035419
176014
Bacillota
TCT
Arg
>WENV181508786
OGGQ01001479
284506
Bacillota
CCA
Trp
>WENV181509526
OGGQ01006177
280447
Bacillota
GAC
Val
>WENV181509146
OGGQ01002927
280447
Bacillota
GAC
Val
>WENV181508957
OGGQ01002036
280447
Bacillota
GAC
Val
>WENV181508946
OGGQ01001997
280447
Bacillota
GAC
Val
>WENV181508882
OGGQ01001745
280447
Bacillota
GAC
Val
>WENV181510146
OGGQ01035419
480360
Bacillota
GCA
Cys
>WENV181509917
OGGQ01017127
5692
Bacillota
GCT
Ser
>WENV181508965
OGGQ01002075
5692
Bacillota
GCT
Ser
>WENV181509846
OGGQ01013579
203929
Bacillota
TCT
Arg
>WENV181508253
OGGQ01000258
312274
Bacillota
GGC
Ala
>WENV181508872
OGGQ01001681
186123
Bacillota
GTC
Asp
>WENV181508676
OGGQ01001140
186123
Bacillota
GTC
Asp
>WENV181508481
OGGQ01000648
186123
Bacillota
GTC
Asp
>WENV181508094
OGGQ01000089
284723
Bacillota
TAC
Val
>WENV181507999
OGGQ01000027
284723
Bacillota
TAC
Val
>WENV181509253
OGGQ01003470
73009
Bacillota
CAG
Leu
>WENV181509065
OGGQ01002530
73009
Bacillota
CAG
Leu
>WENV181508967
OGGQ01002078
73009
Bacillota
CAG
Leu
>WENV181508537
OGGQ01000781
73009
Bacillota
CAG
Leu
>WENV181508535
OGGQ01000781
73009
Bacillota
CAG
Leu
>WENV181509033
OGGQ01002388
481217
Bacillota
GCA
Cys
>WENV181510245
OGGQ01054051
280646
Bacillota
TGC
Ala
>WENV181509649
OGGQ01008200
407726
Bacillota
CTG
Gln
>WENV181509496
OGGQ01005783
291581
Bacillota
CGG
Pro
>WENV181509213
OGGQ01003234
291581
Bacillota
CGG
Pro
>WENV181508625
OGGQ01000972
291581
Bacillota
CGG
Pro
>WENV181509407
OGGQ01004541
175859
Bacillota
TCT
Arg
>WENV181510160
OGGQ01037367
398835
Bacillota
GCC
Gly
>WENV181508956
OGGQ01002017
175831
Bacillota
ACG
Arg
>WENV181508794
OGGQ01001491
332181
Bacillota
TGT
Thr
>WENV181510186
OGGQ01041455
510876
Bacillota
GGT
Thr
>WENV181510144
OGGQ01035419
176015
Bacillota
TGG
Pro
>WENV181508873
OGGQ01001681
291634
Bacillota
GAA
Phe
>WENV181508482
OGGQ01000648
291634
Bacillota
GAA
Phe
>WENV181509085
OGGQ01002634
346451
Bacillota
TTT
Lys
>WENV181509061
OGGQ01002522
346451
Bacillota
TTT
Lys
>WENV181510200
OGGQ01044550
176657
Bacillota
GTC
Asp
>WENV181510134
OGGQ01035419
478081
Bacillota
TGT
Thr
>WENV181509215
OGGQ01003273
27216
Bacillota
GCT
Ser
>WENV181509495
OGGQ01005783
480322
Bacillota
CTG
Gln
>WENV181509256
OGGQ01003489
480322
Bacillota
CTG
Gln
>WENV181509212
OGGQ01003234
480322
Bacillota
CTG
Gln
>WENV181509014
OGGQ01002316
480322
Bacillota
CTG
Gln
>WENV181508624
OGGQ01000972
480322
Bacillota
CTG
Gln
>WENV181508420
OGGQ01000525
480322
Bacillota
CTG
Gln
>WENV181508001
OGGQ01000027
187364
Bacillota
CAT
Met
>WENV181508000
OGGQ01000027
187364
Bacillota
CAT
Met
>WENV181509715
OGGQ01009669
175868
Bacillota
GTT
Asn
>WENV181508273
OGGQ01000298
175868
Bacillota
GTT
Asn
>WENV181509714
OGGQ01009669
398854
Bacillota
CTC
Glu
>WENV181509389
OGGQ01004363
291576
Bacillota
CCC
Gly
>WENV181509122
OGGQ01002812
291576
Bacillota
CCC
Gly
>WENV181508426
OGGQ01000532
291576
Bacillota
CCC
Gly
>WENV181508802
OGGQ01001503
287280
Bacillota
TGT
Thr
>WENV181509224
OGGQ01003333
480324
Bacillota
TTG
Gln
>WENV181509211
OGGQ01003234
480324
Bacillota
TTG
Gln
>WENV181508395
OGGQ01000491
480324
Bacillota
TTG
Gln
>WENV181509580
OGGQ01006958
120213
Bacillota
GTA
Tyr
>WENV181509225
OGGQ01003349
400963
Bacillota
GTT
Asn
>WENV181510193
OGGQ01043341
497729
Bacillota
CCA
Trp
>WENV181509867
OGGQ01014594
497729
Bacillota
CCA
Trp
>WENV181509682
OGGQ01008937
497729
Bacillota
CCA
Trp
>WENV181508400
OGGQ01000501
497729
Bacillota
CCA
Trp
>WENV181508283
OGGQ01000304
180688
Bacillota
GTC
Asp
>WENV181510279
OGGQ01062556
407858
Bacillota
GCC
Gly
>WENV181509891
OGGQ01015749
303718
Bacillota
TGT
Thr
>WENV181509266
OGGQ01003582
303718
Bacillota
TGT
Thr
>WENV181508289
OGGQ01000315
303718
Bacillota
TGT
Thr
>WENV181509002
OGGQ01002274
73638
Bacillota
AAG
Leu
>WENV181509929
OGGQ01018088
323864
Bacillota
TGC
Ala
>WENV181510082
OGGQ01027570
175911
Bacillota
GTC
Asp
>WENV181508303
OGGQ01000329
175911
Bacillota
GTC
Asp
>WENV181508386
OGGQ01000471
46655
Bacillota
TGA
Ser
>WENV181510328
OGGQ01077418
292374
Bacillota
TGC
Ala
>WENV181510145
OGGQ01035419
176019
Bacillota
GTG
His
>WENV181510209
OGGQ01044693
186051
Bacillota
GAT
Ile
>WENV181510086
OGGQ01027857
204381
Bacillota
GAT
Ile
>WENV181509720
OGGQ01009863
280444
Bacillota
GGT
Thr
>WENV181509410
OGGQ01004645
280444
Bacillota
GGT
Thr
>WENV181509352
OGGQ01004091
280444
Bacillota
GGT
Thr
>WENV181509351
OGGQ01004091
280444
Bacillota
GGT
Thr
>WENV181509252
OGGQ01003455
280444
Bacillota
GGT
Thr
>WENV181508940
OGGQ01001960
280444
Bacillota
GGT
Thr
>WENV181510094
OGGQ01029535
342104
Bacillota
TAC
Val
>WENV181509941
OGGQ01018360
321753
Bacillota
GCC
Gly
>WENV181509792
OGGQ01011692
321753
Bacillota
GCC
Gly
>WENV181508711
OGGQ01001229
321753
Bacillota
GCC
Gly
>WENV181509897
OGGQ01016122
179755
Bacillota
CCG
Arg
>WENV181508968
OGGQ01002081
179755
Bacillota
CCG
Arg
>WENV181508674
OGGQ01001128
179755
Bacillota
CCG
Arg
>WENV181510194
OGGQ01043621
52748
Bacillota
TGA
Ser
>WENV181508911
OGGQ01001875
280476
Bacillota
TTT
Lys
>WENV181507996
OGGQ01000025
280476
Bacillota
TTT
Lys
>WENV181507994
OGGQ01000025
280476
Bacillota
TTT
Lys
>WENV181510059
OGGQ01026095
201856
Bacillota
GAT
Ile
>WENV181508797
OGGQ01001491
289123
Bacillota
GGT
Thr
>WENV181510203
OGGQ01044550
444984
Bacillota
GCC
Gly
>WENV181509359
OGGQ01004098
280483
Bacillota
GAA
Phe
>WENV181509360
OGGQ01004098
285756
Bacillota
GCC
Gly
>WENV181508817
OGGQ01001540
285756
Bacillota
GCC
Gly
>WENV181508739
OGGQ01001332
398833
Bacillota
TGT
Thr
>WENV181508181
OGGQ01000165
398833
Bacillota
TGT
Thr
>WENV181509618
OGGQ01007471
516671
Bacillota
TCC
Gly
>WENV181508281
OGGQ01000304
285556
Bacillota
TGT
Thr
>WENV181509719
OGGQ01009863
175849
Bacillota
GTC
Asp
>WENV181509350
OGGQ01004091
175849
Bacillota
GTC
Asp
>WENV181508939
OGGQ01001960
175849
Bacillota
GTC
Asp
>WENV181510112
OGGQ01032349
280486
Bacillota
TGC
Ala
>WENV181509118
OGGQ01002794
405393
Bacillota
GCC
Gly
>WENV181508677
OGGQ01001140
405393
Bacillota
GCC
Gly
>WENV181508483
OGGQ01000648
405393
Bacillota
GCC
Gly
>WENV181509916
OGGQ01017127
56074
Bacillota
TGA
Ser
>WENV181508964
OGGQ01002075
56074
Bacillota
TGA
Ser
>WENV181509859
OGGQ01014114
280473
Bacillota
TGG
Pro
>WENV181509665
OGGQ01008617
280473
Bacillota
TGG
Pro
>WENV181509515
OGGQ01006058
280473
Bacillota
TGG
Pro
>WENV181509261
OGGQ01003545
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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