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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181843300
OGVU01007349
189770
Actinomycetota
GAA
Phe
>WENV181843115
OGVU01000893
284896
Actinomycetota
CTC
Glu
>WENV181843085
OGVU01000591
119438
Actinomycetota
GTA
Tyr
>WENV181843416
OGVU01013783
291869
Actinomycetota
TGC
Ala
>WENV181843514
OGVU01021524
407367
Actinomycetota
TGT
Thr
>WENV181843298
OGVU01007349
289635
Actinomycetota
TTC
Glu
>WENV181843758
OGVU01059653
481421
Actinomycetota
TCC
Gly
>WENV181843194
OGVU01002748
184461
Actinomycetota
CCA
Trp
>WENV181843225
OGVU01003963
294850
Actinomycetota
GCC
Gly
>WENV181843258
OGVU01005305
459980
Actinomycetota
GAC
Val
>WENV181843310
OGVU01008059
294908
Actinomycetota
CCT
Arg
>WENV181843204
OGVU01003120
315779
Actinomycetota
GGC
Ala
>WENV181843415
OGVU01013783
223227
Actinomycetota
GAT
Ile
>WENV181843131
OGVU01001345
157052
Actinomycetota
GAT
Ile
>WENV181843160
OGVU01001717
86212
Actinomycetota
GAG
Leu
>WENV181843157
OGVU01001664
189000
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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