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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181898693
OGXT01010265
407608
Thermodesulfobacteriota
TTG
Gln
>WENV181898726
OGXT01011103
214925
Thermodesulfobacteriota
GTC
Asp
>WENV181898244
OGXT01003115
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV181898500
OGXT01005818
295177
Thermodesulfobacteriota
CTT
Lys
>WENV181898438
OGXT01005145
294203
Thermodesulfobacteriota
GGC
Ala
>WENV181898702
OGXT01010498
294203
Thermodesulfobacteriota
GGC
Ala
>WENV181897801
OGXT01000893
188874
Thermodesulfobacteriota
TTC
Glu
>WENV181899100
OGXT01074180
183758
Thermodesulfobacteriota
CCA
Trp
>WENV181898246
OGXT01003115
183758
Thermodesulfobacteriota
CCA
Trp
>WENV181898949
OGXT01030834
302242
Thermodesulfobacteriota
GAA
Phe
>WENV181898909
OGXT01025781
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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