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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181903675
OGXX01002195
179231
Actinomycetota
TAC
Val
>WENV181904483
OGXX01013949
482602
Actinomycetota
CCC
Gly
>WENV181903571
OGXX01001674
176499
Actinomycetota
CAT
Met
>WENV181903592
OGXX01001752
175883
Actinomycetota
GAT
Ile
>WENV181905018
OGXX01068428
285746
Actinomycetota
GGC
Ala
>WENV181904823
OGXX01037544
14009
Actinomycetota
GGA
Ser
>WENV181903736
OGXX01002564
280498
Actinomycetota
GTT
Asn
>WENV181902942
OGXX01000136
280503
Actinomycetota
CCT
Arg
>WENV181904184
OGXX01007374
176639
Actinomycetota
CGG
Pro
>WENV181903976
OGXX01004536
175837
Actinomycetota
ACG
Arg
>WENV181904098
OGXX01005896
46681
Actinomycetota
CGA
Ser
>WENV181903642
OGXX01002025
302133
Actinomycetota
CAC
Val
>WENV181904439
OGXX01012608
176500
Actinomycetota
CAT
Met
>WENV181903643
OGXX01002025
302202
Actinomycetota
GCC
Gly
>WENV181903524
OGXX01001536
398843
Actinomycetota
GTT
Asn
>WENV181903666
OGXX01002123
117881
Actinomycetota
TAG
Leu
>WENV181903674
OGXX01002187
176638
Actinomycetota
GGG
Pro
>WENV181904993
OGXX01061091
484283
Actinomycetota
CTG
Gln
>WENV181903084
OGXX01000348
291585
Actinomycetota
GCC
Gly
>WENV181903304
OGXX01000830
281239
Actinomycetota
TTT
Lys
>WENV181905029
OGXX01071236
280523
Actinomycetota
GGC
Ala
>WENV181903641
OGXX01002025
418252
Actinomycetota
GAC
Val
>WENV181904164
OGXX01006886
179229
Actinomycetota
GTC
Asp
>WENV181902786
OGXX01000003
280536
Actinomycetota
CTT
Lys
>WENV181903330
OGXX01000912
56153
Actinomycetota
GGA
Ser
>WENV181904936
OGXX01051481
189180
Actinomycetota
GGG
Pro
>WENV181903082
OGXX01000345
175926
Actinomycetota
CAT
Met
>WENV181902879
OGXX01000071
483206
Actinomycetota
CTG
Gln
>WENV181904577
OGXX01017724
175882
Actinomycetota
TGG
Pro
>WENV181904168
OGXX01006990
20209
Actinomycetota
GAG
Leu
>WENV181904401
OGXX01011658
283352
Actinomycetota
GCC
Gly
>WENV181903854
OGXX01003401
398853
Actinomycetota
CTG
Gln
>WENV181903879
OGXX01003528
176642
Actinomycetota
CAA
Leu
>WENV181903853
OGXX01003401
289788
Actinomycetota
CTC
Glu
>WENV181903570
OGXX01001674
117903
Actinomycetota
GTA
Tyr
>WENV181903665
OGXX01002123
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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