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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181973378
OHAA01035823
407608
Thermodesulfobacteriota
TTG
Gln
>WENV181973028
OHAA01008403
214925
Thermodesulfobacteriota
GTC
Asp
>WENV181973029
OHAA01008403
214925
Thermodesulfobacteriota
GTC
Asp
>WENV181973252
OHAA01020570
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV181972579
OHAA01000796
175867
Thermodesulfobacteriota
GGG
Pro
>WENV181973424
OHAA01043393
295177
Thermodesulfobacteriota
CTT
Lys
>WENV181973462
OHAA01052183
294203
Thermodesulfobacteriota
GGC
Ala
>WENV181973250
OHAA01020392
188874
Thermodesulfobacteriota
TTC
Glu
>WENV181972673
OHAA01001682
188874
Thermodesulfobacteriota
TTC
Glu
>WENV181972868
OHAA01004125
183758
Thermodesulfobacteriota
CCA
Trp
>WENV181973440
OHAA01046952
302242
Thermodesulfobacteriota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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