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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182405923
OIEX01000017
178066
Bacillota
CAT
Met
>WENV182406164
OIEX01000936
57121
Bacillota
GGA
Ser
>WENV182406258
OIEX01006317
118683
Bacillota
GTA
Tyr
>WENV182406161
OIEX01000831
280870
Bacillota
TGC
Ala
>WENV182406150
OIEX01000720
184537
Bacillota
ACG
Arg
>WENV182405936
OIEX01000020
29462
Bacillota
GGA
Ser
>WENV182406085
OIEX01000296
408526
Bacillota
GCA
Cys
>WENV182405925
OIEX01000017
400111
Bacillota
GTT
Asn
>WENV182405933
OIEX01000020
176678
Bacillota
GTC
Asp
>WENV182406222
OIEX01002416
400904
Bacillota
CCT
Arg
>WENV182406097
OIEX01000326
48505
Bacillota
TGA
Ser
>WENV182406212
OIEX01002022
13634
Bacillota
CGA
Ser
>WENV182405927
OIEX01000018
291629
Bacillota
CCA
Trp
>WENV182406146
OIEX01000671
289717
Bacillota
CTT
Lys
>WENV182406024
OIEX01000173
20360
Bacillota
TGA
Ser
>WENV182406243
OIEX01003640
179563
Bacillota
GAT
Ile
>WENV182406157
OIEX01000726
282752
Bacillota
TTT
Lys
>WENV182406138
OIEX01000571
20932
Bacillota
GCT
Ser
>WENV182405878
OIEX01000003
141334
Bacillota
TAG
Leu
>WENV182406158
OIEX01000742
482593
Bacillota
CCC
Gly
>WENV182406170
OIEX01001014
339995
Bacillota
TGC
Ala
>WENV182406069
OIEX01000272
20942
Bacillota
GGA
Ser
>WENV182406197
OIEX01001452
400905
Bacillota
CCG
Arg
>WENV182406189
OIEX01001260
281303
Bacillota
CTT
Lys
>WENV182405881
OIEX01000003
281303
Bacillota
CTT
Lys
>WENV182405910
OIEX01000009
415857
Bacillota
GTT
Asn
>WENV182406040
OIEX01000192
280871
Bacillota
GAA
Phe
>WENV182405935
OIEX01000020
415856
Bacillota
CCT
Arg
>WENV182406133
OIEX01000559
141202
Bacillota
CAA
Leu
>WENV182405924
OIEX01000017
46663
Bacillota
TAA
Leu
>WENV182406049
OIEX01000238
29614
Bacillota
GGA
Ser
>WENV182405980
OIEX01000073
480905
Bacillota
TCC
Gly
>WENV182406003
OIEX01000122
480905
Bacillota
TCC
Gly
>WENV182406152
OIEX01000726
480905
Bacillota
TCC
Gly
>WENV182406153
OIEX01000726
282756
Bacillota
CTT
Lys
>WENV182405961
OIEX01000052
100098
Bacillota
GAG
Leu
>WENV182405907
OIEX01000009
232298
Bacillota
ACG
Arg
>WENV182406035
OIEX01000185
293309
Bacillota
GTT
Asn
>WENV182406117
OIEX01000476
289713
Bacillota
TGT
Thr
>WENV182406175
OIEX01001066
404091
Bacillota
TTG
Gln
>WENV182406027
OIEX01000175
399272
Bacillota
GCA
Cys
>WENV182406087
OIEX01000300
284389
Bacillota
CTT
Lys
>WENV182405914
OIEX01000013
141533
Bacillota
CAA
Leu
>WENV182406192
OIEX01001300
497761
Bacillota
TCC
Gly
>WENV182405880
OIEX01000003
497761
Bacillota
TCC
Gly
>WENV182406174
OIEX01001066
289716
Bacillota
GTG
His
>WENV182405974
OIEX01000063
314834
Bacillota
TGC
Ala
>WENV182405981
OIEX01000074
73395
Bacillota
CAA
Leu
>WENV182405926
OIEX01000018
120584
Bacillota
GTA
Tyr
>WENV182406105
OIEX01000390
100097
Bacillota
GTA
Tyr
>WENV182405921
OIEX01000017
52257
Bacillota
TAA
Leu
>WENV182406263
OIEX01006896
508151
Bacillota
GGT
Thr
>WENV182406025
OIEX01000173
20361
Bacillota
GCT
Ser
>WENV182406036
OIEX01000185
432453
Bacillota
TTC
Glu
>WENV182406095
OIEX01000325
480337
Bacillota
TCC
Gly
>WENV182406151
OIEX01000720
119459
Bacillota
TAG
Leu
>WENV182406155
OIEX01000726
282757
Bacillota
GTG
His
>WENV182406194
OIEX01001386
280547
Bacillota
GTC
Asp
>WENV182406082
OIEX01000296
280547
Bacillota
GTC
Asp
>WENV182406084
OIEX01000296
445407
Bacillota
GCC
Gly
>WENV182406008
OIEX01000132
445407
Bacillota
GCC
Gly
>WENV182406131
OIEX01000523
344985
Bacillota
GAA
Phe
>WENV182406225
OIEX01002684
401835
Bacillota
GCA
Cys
>WENV182406154
OIEX01000726
176771
Bacillota
TCT
Arg
>WENV182406026
OIEX01000173
178065
Bacillota
ACG
Arg
>WENV182406168
OIEX01000994
284390
Bacillota
CGT
Thr
>WENV182405928
OIEX01000018
203851
Bacillota
TCT
Arg
>WENV182406088
OIEX01000301
449573
Bacillota
>WENV182405989
OIEX01000097
282754
Bacillota
TGT
Thr
>WENV182406104
OIEX01000390
282754
Bacillota
TGT
Thr
>WENV182406144
OIEX01000637
282754
Bacillota
TGT
Thr
>WENV182405937
OIEX01000024
282758
Bacillota
CCA
Trp
>WENV182406045
OIEX01000215
282755
Bacillota
GGT
Thr
>WENV182406037
OIEX01000185
289715
Bacillota
TAC
Val
>WENV182406093
OIEX01000325
20943
Bacillota
CGA
Ser
>WENV182405934
OIEX01000020
399260
Bacillota
TGT
Thr
>WENV182406094
OIEX01000325
208539
Bacillota
TGG
Pro
>WENV182406096
OIEX01000325
184539
Bacillota
TCT
Arg
>WENV182405931
OIEX01000020
399261
Bacillota
>WENV182406156
OIEX01000726
400113
Bacillota
TTG
Gln
>WENV182406048
OIEX01000238
400110
Bacillota
CCT
Arg
>WENV182406167
OIEX01000994
53302
Bacillota
AAG
Leu
>WENV182405938
OIEX01000024
318172
Bacillota
CCA
Trp
>WENV182406132
OIEX01000540
282751
Bacillota
TGC
Ala
>WENV182406182
OIEX01001178
282751
Bacillota
TGC
Ala
>WENV182406240
OIEX01003640
284680
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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