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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182586033
OJHJ01000370
180052
Gammaproteobacteria
CCT
Arg
>WENV182586019
OJHJ01000303
73123
Gammaproteobacteria
CAA
Leu
>WENV182586204
OJHJ01020505
196766
Gammaproteobacteria
GTT
Asn
>WENV182586083
OJHJ01000929
183804
Gammaproteobacteria
CAT
Met
>WENV182586066
OJHJ01000666
281275
Gammaproteobacteria
TGT
Thr
>WENV182586024
OJHJ01000312
20273
Gammaproteobacteria
TGA
Ser
>WENV182586005
OJHJ01000259
180053
Gammaproteobacteria
CAT
Met
>WENV182585985
OJHJ01000168
176662
Gammaproteobacteria
ACG
Arg
>WENV182585897
OJHJ01000028
73863
Gammaproteobacteria
CAG
Leu
>WENV182586067
OJHJ01000666
140925
Gammaproteobacteria
GTA
Tyr
>WENV182586037
OJHJ01000411
281282
Gammaproteobacteria
TTC
Glu
>WENV182585944
OJHJ01000103
329164
Gammaproteobacteria
TTT
Lys
>WENV182585943
OJHJ01000102
176663
Gammaproteobacteria
GGG
Pro
>WENV182586076
OJHJ01000758
178471
Gammaproteobacteria
GTT
Asn
>WENV182585956
OJHJ01000117
351236
Gammaproteobacteria
TTT
Lys
>WENV182585921
OJHJ01000061
351236
Gammaproteobacteria
TTT
Lys
>WENV182586003
OJHJ01000251
480516
Gammaproteobacteria
GCA
Cys
>WENV182586008
OJHJ01000276
480516
Gammaproteobacteria
GCA
Cys
>WENV182585990
OJHJ01000208
243308
Gammaproteobacteria
TGG
Pro
>WENV182586148
OJHJ01005222
182472
Gammaproteobacteria
GTC
Asp
>WENV182586137
OJHJ01003496
330451
Gammaproteobacteria
TTG
Gln
>WENV182586131
OJHJ01002805
76195
Gammaproteobacteria
CAA
Leu
>WENV182586070
OJHJ01000677
280812
Gammaproteobacteria
GAA
Phe
>WENV182586139
OJHJ01003496
130635
Gammaproteobacteria
TAG
Leu
>WENV182586039
OJHJ01000412
176661
Gammaproteobacteria
GAC
Val
>WENV182586136
OJHJ01003159
401684
Gammaproteobacteria
CCT
Arg
>WENV182586114
OJHJ01002070
232119
Gammaproteobacteria
ACG
Arg
>WENV182586151
OJHJ01005367
74048
Gammaproteobacteria
CAA
Leu
>WENV182586099
OJHJ01001339
481678
Gammaproteobacteria
GCA
Cys
>WENV182586002
OJHJ01000251
306288
Gammaproteobacteria
GCC
Gly
>WENV182586038
OJHJ01000411
306288
Gammaproteobacteria
GCC
Gly
>WENV182585964
OJHJ01000132
176664
Gammaproteobacteria
CCT
Arg
>WENV182585978
OJHJ01000150
346373
Gammaproteobacteria
GAA
Phe
>WENV182586138
OJHJ01003496
176544
Gammaproteobacteria
CAT
Met
>WENV182586167
OJHJ01008200
180680
Gammaproteobacteria
GAC
Val
>WENV182586121
OJHJ01002659
176301
Gammaproteobacteria
GAT
Ile
>WENV182585995
OJHJ01000227
56623
Gammaproteobacteria
GGA
Ser
>WENV182585941
OJHJ01000098
176665
Gammaproteobacteria
CGG
Pro
>WENV182586132
OJHJ01002936
285547
Gammaproteobacteria
TTG
Gln
>WENV182586110
OJHJ01002009
285547
Gammaproteobacteria
TTG
Gln
>WENV182586140
OJHJ01003496
180681
Gammaproteobacteria
TGG
Pro
>WENV182586104
OJHJ01001753
180681
Gammaproteobacteria
TGG
Pro
>WENV182586182
OJHJ01014155
14091
Gammaproteobacteria
TGA
Ser
>WENV182585992
OJHJ01000208
281283
Gammaproteobacteria
GTG
His
>WENV182585987
OJHJ01000175
186591
Gammaproteobacteria
ACG
Arg
>WENV182586094
OJHJ01001126
282902
Gammaproteobacteria
TGT
Thr
>WENV182586071
OJHJ01000727
282902
Gammaproteobacteria
TGT
Thr
>WENV182586049
OJHJ01000499
180679
Gammaproteobacteria
CCA
Trp
>WENV182586105
OJHJ01001870
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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