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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182590603
OJIJ01000210
282684
Gammaproteobacteria
TTC
Glu
>WENV182590600
OJIJ01000146
281440
Gammaproteobacteria
TGT
Thr
>WENV182590620
OJIJ01000425
180719
Gammaproteobacteria
ACG
Arg
>WENV182590614
OJIJ01000379
282687
Gammaproteobacteria
GCC
Gly
>WENV182590649
OJIJ01002030
178175
Gammaproteobacteria
ACG
Arg
>WENV182590608
OJIJ01000318
118078
Gammaproteobacteria
GTA
Tyr
>WENV182590631
OJIJ01000827
285584
Gammaproteobacteria
TTT
Lys
>WENV182590611
OJIJ01000364
180717
Gammaproteobacteria
CCA
Trp
>WENV182590637
OJIJ01000971
296670
Gammaproteobacteria
TGT
Thr
>WENV182590652
OJIJ01002297
285953
Gammaproteobacteria
CCT
Arg
>WENV182590657
OJIJ01002678
303448
Gammaproteobacteria
>WENV182590658
OJIJ01002678
481206
Gammaproteobacteria
GCA
Cys
>WENV182590659
OJIJ01002678
102898
Gammaproteobacteria
TAA
Leu
>WENV182590664
OJIJ01004019
180998
Gammaproteobacteria
GAC
Val
>WENV182590609
OJIJ01000338
180718
Gammaproteobacteria
CAT
Met
>WENV182590615
OJIJ01000379
118082
Gammaproteobacteria
TAA
Leu
>WENV182590574
OJIJ01000012
287558
Gammaproteobacteria
TTC
Glu
>WENV182590602
OJIJ01000210
282683
Gammaproteobacteria
GGC
Ala
>WENV182590636
OJIJ01000971
302291
Gammaproteobacteria
GAA
Phe
>WENV182590605
OJIJ01000261
20620
Gammaproteobacteria
TGA
Ser
>WENV182590642
OJIJ01001132
176301
Gammaproteobacteria
GAT
Ile
>WENV182590619
OJIJ01000425
13469
Gammaproteobacteria
GCT
Ser
>WENV182590623
OJIJ01000578
178009
Gammaproteobacteria
TGG
Pro
>WENV182590667
OJIJ01007270
120800
Gammaproteobacteria
CAA
Leu
>WENV182590661
OJIJ01003446
21947
Gammaproteobacteria
TGA
Ser
>WENV182590633
OJIJ01000863
285954
Gammaproteobacteria
GAA
Phe
>WENV182590632
OJIJ01000827
56726
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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