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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182954430
OKWA01001115
180990
Bacillota
CGG
Pro
>WENV182954422
OKWA01001007
401879
Bacillota
TTG
Gln
>WENV182954622
OKWA01007297
401879
Bacillota
TTG
Gln
>WENV182954490
OKWA01002479
403686
Bacillota
>WENV182954463
OKWA01001700
74057
Bacillota
CAG
Leu
>WENV182954256
OKWA01000215
184537
Bacillota
ACG
Arg
>WENV182954685
OKWA01014911
408526
Bacillota
GCA
Cys
>WENV182954424
OKWA01001007
56397
Bacillota
CAA
Leu
>WENV182954440
OKWA01001270
285945
Bacillota
TTT
Lys
>WENV182954457
OKWA01001630
285565
Bacillota
CTG
Gln
>WENV182954384
OKWA01000591
296855
Bacillota
GGT
Thr
>WENV182954441
OKWA01001270
281413
Bacillota
TGT
Thr
>WENV182954323
OKWA01000428
180700
Bacillota
GTC
Asp
>WENV182954378
OKWA01000583
180700
Bacillota
GTC
Asp
>WENV182954391
OKWA01000690
20932
Bacillota
GCT
Ser
>WENV182954210
OKWA01000153
291553
Bacillota
GAA
Phe
>WENV182954730
OKWA01022317
283493
Bacillota
CTC
Glu
>WENV182954308
OKWA01000373
482593
Bacillota
CCC
Gly
>WENV182954537
OKWA01003645
176014
Bacillota
TCT
Arg
>WENV182954321
OKWA01000428
421660
Bacillota
TTC
Glu
>WENV182954565
OKWA01004650
421660
Bacillota
TTC
Glu
>WENV182954624
OKWA01007532
421660
Bacillota
TTC
Glu
>WENV182954208
OKWA01000153
20942
Bacillota
GGA
Ser
>WENV182954459
OKWA01001667
13457
Bacillota
CGA
Ser
>WENV182954423
OKWA01001007
501142
Bacillota
GCA
Cys
>WENV182954354
OKWA01000499
144756
Bacillota
GTA
Tyr
>WENV182954464
OKWA01001710
144756
Bacillota
GTA
Tyr
>WENV182954408
OKWA01000926
280890
Bacillota
GAA
Phe
>WENV182954534
OKWA01003548
280646
Bacillota
TGC
Ala
>WENV182954719
OKWA01020985
20465
Bacillota
TGA
Ser
>WENV182954439
OKWA01001270
302092
Bacillota
TAC
Val
>WENV182954472
OKWA01001820
283795
Bacillota
CTT
Lys
>WENV182954473
OKWA01001820
283795
Bacillota
CTT
Lys
>WENV182954421
OKWA01001007
285949
Bacillota
GTG
His
>WENV182954385
OKWA01000591
184495
Bacillota
CAT
Met
>WENV182954443
OKWA01001338
141202
Bacillota
CAA
Leu
>WENV182954629
OKWA01008034
314710
Bacillota
CGT
Thr
>WENV182954477
OKWA01001931
180701
Bacillota
TCT
Arg
>WENV182954579
OKWA01005394
285946
Bacillota
GGT
Thr
>WENV182954683
OKWA01014038
332864
Bacillota
CTT
Lys
>WENV182954638
OKWA01009198
180992
Bacillota
CCT
Arg
>WENV182954407
OKWA01000926
282730
Bacillota
TAC
Val
>WENV182954554
OKWA01004226
20854
Bacillota
CGA
Ser
>WENV182954381
OKWA01000591
289713
Bacillota
TGT
Thr
>WENV182954413
OKWA01000926
73624
Bacillota
CAA
Leu
>WENV182954404
OKWA01000917
404091
Bacillota
TTG
Gln
>WENV182954403
OKWA01000917
289716
Bacillota
GTG
His
>WENV182954369
OKWA01000526
285563
Bacillota
CCT
Arg
>WENV182954735
OKWA01022462
352154
Bacillota
TAC
Val
>WENV182954703
OKWA01017072
432453
Bacillota
TTC
Glu
>WENV182954699
OKWA01017072
432453
Bacillota
TTC
Glu
>WENV182954595
OKWA01006277
480337
Bacillota
TCC
Gly
>WENV182954437
OKWA01001249
400600
Bacillota
TTG
Gln
>WENV182954445
OKWA01001346
400600
Bacillota
TTG
Gln
>WENV182954196
OKWA01000130
204381
Bacillota
GAT
Ile
>WENV182954341
OKWA01000469
119459
Bacillota
TAG
Leu
>WENV182954420
OKWA01001007
480918
Bacillota
>WENV182954702
OKWA01017072
333281
Bacillota
GTT
Asn
>WENV182954697
OKWA01017072
333281
Bacillota
GTT
Asn
>WENV182954409
OKWA01000926
100473
Bacillota
GTA
Tyr
>WENV182954444
OKWA01001346
100473
Bacillota
GTA
Tyr
>WENV182954507
OKWA01002803
119281
Bacillota
>WENV182954312
OKWA01000384
280547
Bacillota
GTC
Asp
>WENV182954209
OKWA01000153
280547
Bacillota
GTC
Asp
>WENV182954462
OKWA01001700
401689
Bacillota
CCG
Arg
>WENV182954701
OKWA01017072
445407
Bacillota
GCC
Gly
>WENV182954696
OKWA01017072
445407
Bacillota
GCC
Gly
>WENV182954684
OKWA01014911
445407
Bacillota
GCC
Gly
>WENV182954314
OKWA01000393
445407
Bacillota
GCC
Gly
>WENV182954698
OKWA01017072
289761
Bacillota
TTT
Lys
>WENV182954405
OKWA01000917
289761
Bacillota
TTT
Lys
>WENV182954689
OKWA01015745
175915
Bacillota
GTC
Asp
>WENV182954591
OKWA01006027
74129
Bacillota
CAG
Leu
>WENV182954704
OKWA01017072
289715
Bacillota
TAC
Val
>WENV182954700
OKWA01017072
289715
Bacillota
TAC
Val
>WENV182954374
OKWA01000557
289715
Bacillota
TAC
Val
>WENV182954344
OKWA01000483
20943
Bacillota
CGA
Ser
>WENV182954412
OKWA01000926
481152
Bacillota
GCA
Cys
>WENV182954594
OKWA01006277
208539
Bacillota
TGG
Pro
>WENV182954246
OKWA01000208
285601
Bacillota
TTC
Glu
>WENV182954245
OKWA01000208
285601
Bacillota
TTC
Glu
>WENV182954547
OKWA01003831
180702
Bacillota
CGG
Pro
>WENV182954729
OKWA01021705
179166
Bacillota
TCT
Arg
>WENV182954411
OKWA01000926
156219
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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