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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183271136
OLRV01068445
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183270358
OLRV01006574
214925
Thermodesulfobacteriota
GTC
Asp
>WENV183269877
OLRV01001855
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183271013
OLRV01043067
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183270977
OLRV01036670
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183270082
OLRV01003240
294203
Thermodesulfobacteriota
GGC
Ala
>WENV183270908
OLRV01028856
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183269879
OLRV01001855
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183270701
OLRV01017486
302242
Thermodesulfobacteriota
GAA
Phe
>WENV183269785
OLRV01001363
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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