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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183620957
OOFT01000574
480996
Bacteroidota
CCA
Trp
>WENV183621060
OOFT01004100
182327
Bacteroidota
TGT
Thr
>WENV183621079
OOFT01004800
182327
Bacteroidota
TGT
Thr
>WENV183621032
OOFT01002846
118416
Bacteroidota
TAG
Leu
>WENV183621338
OOFT01054450
156605
Bacteroidota
GAC
Val
>WENV183621020
OOFT01002457
102525
Bacteroidota
GAG
Leu
>WENV183621374
OOFT01075076
402090
Bacteroidota
TTG
Gln
>WENV183621221
OOFT01021410
320669
Bacteroidota
GAA
Phe
>WENV183621141
OOFT01009565
287318
Bacteroidota
GAA
Phe
>WENV183621226
OOFT01022317
178527
Bacteroidota
CAT
Met
>WENV183621018
OOFT01002457
285588
Bacteroidota
TTT
Lys
>WENV183621019
OOFT01002457
285588
Bacteroidota
TTT
Lys
>WENV183621283
OOFT01039792
285588
Bacteroidota
TTT
Lys
>WENV183621284
OOFT01039792
285588
Bacteroidota
TTT
Lys
>WENV183621126
OOFT01007668
30621
Bacteroidota
GCT
Ser
>WENV183621312
OOFT01045125
283107
Bacteroidota
GCC
Gly
>WENV183621041
OOFT01003198
441920
Bacteroidota
TTC
Glu
>WENV183621040
OOFT01003198
441920
Bacteroidota
TTC
Glu
>WENV183621089
OOFT01005796
182371
Bacteroidota
CAT
Met
>WENV183621057
OOFT01004030
284409
Bacteroidota
CAT
Met
>WENV183621038
OOFT01003140
413853
Bacteroidota
GGT
Thr
>WENV183620979
OOFT01001052
233847
Bacteroidota
TGC
Ala
>WENV183621128
OOFT01007668
178367
Bacteroidota
TCT
Arg
>WENV183621250
OOFT01030983
177901
Bacteroidota
GTT
Asn
>WENV183621313
OOFT01045125
46780
Bacteroidota
TAA
Leu
>WENV183620972
OOFT01000900
482119
Bacteroidota
TTG
Gln
>WENV183621088
OOFT01005692
119078
Bacteroidota
TAG
Leu
>WENV183621160
OOFT01013070
399343
Bacteroidota
TTC
Glu
>WENV183621360
OOFT01071326
162868
Bacteroidota
TAC
Val
>WENV183621061
OOFT01004100
142822
Bacteroidota
GTA
Tyr
>WENV183621197
OOFT01016344
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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