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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183697253
OUNJ010156400
195199
Alphaproteobacteria
GTC
Asp
>WENV183697214
OUNJ010078674
281235
Alphaproteobacteria
CGC
Ala
>WENV183697269
OUNJ010210557
178731
Alphaproteobacteria
GTC
Asp
>WENV183697023
OUNJ010000699
141969
Alphaproteobacteria
GTA
Tyr
>WENV183697314
OUNJ010342195
141969
Alphaproteobacteria
GTA
Tyr
>WENV183697110
OUNJ010003584
73440
Alphaproteobacteria
CAG
Leu
>WENV183697223
OUNJ010092258
73440
Alphaproteobacteria
CAG
Leu
>WENV183697395
OUNJ010640870
73440
Alphaproteobacteria
CAG
Leu
>WENV183697461
OUNJ011000459
73440
Alphaproteobacteria
CAG
Leu
>WENV183696999
OUNJ010000313
427571
Alphaproteobacteria
GCC
Gly
>WENV183696979
OUNJ010000039
178197
Alphaproteobacteria
CAT
Met
>WENV183697332
OUNJ010401952
178197
Alphaproteobacteria
CAT
Met
>WENV183697360
OUNJ010519404
178197
Alphaproteobacteria
CAT
Met
>WENV183697113
OUNJ010003977
210541
Alphaproteobacteria
CAT
Met
>WENV183697400
OUNJ010665122
404744
Alphaproteobacteria
GCC
Gly
>WENV183696985
OUNJ010000080
200110
Alphaproteobacteria
ACG
Arg
>WENV183697190
OUNJ010051748
200110
Alphaproteobacteria
ACG
Arg
>WENV183697207
OUNJ010075373
200110
Alphaproteobacteria
ACG
Arg
>WENV183697276
OUNJ010244662
185321
Alphaproteobacteria
GAT
Ile
>WENV183696993
OUNJ010000161
480946
Alphaproteobacteria
TTG
Gln
>WENV183697064
OUNJ010001702
480946
Alphaproteobacteria
TTG
Gln
>WENV183697264
OUNJ010200431
480946
Alphaproteobacteria
TTG
Gln
>WENV183697158
OUNJ010025162
304816
Alphaproteobacteria
CGT
Thr
>WENV183697448
OUNJ010940325
304816
Alphaproteobacteria
CGT
Thr
>WENV183697044
OUNJ010001279
118550
Alphaproteobacteria
GAG
Leu
>WENV183697054
OUNJ010001540
118550
Alphaproteobacteria
GAG
Leu
>WENV183697062
OUNJ010001657
118550
Alphaproteobacteria
GAG
Leu
>WENV183697457
OUNJ010979481
118550
Alphaproteobacteria
GAG
Leu
>WENV183697425
OUNJ010787817
398996
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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