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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183741388
PJUG01000002
406663
Betaproteobacteria
CAC
Val
>WENV183741422
PJUG01000010
127222
Betaproteobacteria
CAG
Leu
>WENV183741423
PJUG01000010
127222
Betaproteobacteria
CAG
Leu
>WENV183741389
PJUG01000002
281431
Betaproteobacteria
GTT
Asn
>WENV183741839
PJUG01024404
8858
Betaproteobacteria
GCT
Ser
>WENV183741580
PJUG01000086
56355
Betaproteobacteria
TGA
Ser
>WENV183741429
PJUG01000010
480973
Betaproteobacteria
GCA
Cys
>WENV183741424
PJUG01000010
483989
Betaproteobacteria
>WENV183741530
PJUG01000046
20385
Betaproteobacteria
GGA
Ser
>WENV183741576
PJUG01000083
298213
Betaproteobacteria
TGT
Thr
>WENV183741536
PJUG01000050
400244
Betaproteobacteria
CCT
Arg
>WENV183741488
PJUG01000029
328657
Betaproteobacteria
TAC
Val
>WENV183741532
PJUG01000048
118157
Betaproteobacteria
GAG
Leu
>WENV183741529
PJUG01000046
283018
Betaproteobacteria
TTT
Lys
>WENV183741620
PJUG01000213
178289
Betaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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