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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1001366
SRR001064.11831
179914
Bacteroidota
GGG
Pro
>SRA1001380
SRR001064.55135
198027
Bacteroidota
GGC
Ala
>SRA1001428
SRR001064.265091
179689
Bacteroidota
GTC
Asp
>SRA1001406
SRR001064.162770
179689
Bacteroidota
GTC
Asp
>SRA1001375
SRR001064.44714
228511
Bacteroidota
GAT
Ile
>SRA1001409
SRR001064.168117
399343
Bacteroidota
TTC
Glu
>SRA1001407
SRR001064.162793
399343
Bacteroidota
TTC
Glu
>SRA1001369
SRR001064.17231
402171
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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