tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.147332 (84 seq.)
>W1710878066 LMQQ01000001 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 743954 744030 + Met CAT [ENA] ¡û
>W1710878148 LMQS01000001 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 687990 688066 + Met CAT [ENA] ¡û
>W1710878375 LMQX01000001 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 687705 687781 + Met CAT [ENA] ¡û
>W1710893302 LNEP01000006 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 147355 147431 + Met CAT [ENA] ¡û
>W1711224656 LXUF01000001 Betaproteobacteria Methylovorus sp. MM2 MM1 [LXUF] 635058 634982 - Met CAT [ENA] ¡û
>W131163893 ARAC01000001 Betaproteobacteria Methylophilus sp. 42 [ARAC] 882522 882446 - Met CAT [ENA] ¡û
>W131164743 ARBA01000002 Betaproteobacteria Methylotenera mobilis 13 [ARBA] 319812 319736 - Met CAT [ENA] ¡û
>W131170294 ARFK01000004 Betaproteobacteria Methylophilus sp. 1 [ARFK] 303413 303337 - Met CAT [ENA] ¡û
>W131176246 ARJW01000016 Betaproteobacteria Methylophilus methylotrophus DSM 46235 = ATCC 53528 [ARJW] 579642 579718 + Met CAT [ENA] ¡û
>W131186181 ARVX01000001 Betaproteobacteria Methylotenera versatilis 79 [ARVX] 229949 230025 + Met CAT [ENA] ¡û
>W131186391 ARWC01000001 Betaproteobacteria Methylotenera sp. 1P/1 [ARWC] 1231922 1231998 + Met CAT [ENA] ¡û
>W131186556 ARWF01000001 Betaproteobacteria Methylotenera sp. 73s [ARWF] 1109424 1109500 + Met CAT [ENA] ¡û
>C013407 CP000284 Betaproteobacteria Methylobacillus flagellatus KT [CP000284] 701331 701255 - Met CAT [Ensembl] ¡û
>WENV180094458 MTBK01008212 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 353 429 + Met CAT [ENA] ¢þ
>WENV016795 AACY020470209 Marine microbial communities from Global Ocean Sampling (GOS) 2175 2253 + Met CAT [ENA]
>WENV181187876 OEOE01000932 [OEOE] activated sludge metagenome; Activated Sludge 1836 1912 + Met CAT [ENA] ¢þ
>WENV181187877 OEOE01001005 [OEOE] activated sludge metagenome; Activated Sludge 3193 3117 - Met CAT [ENA] ¢þ
>WENV181187892 OEOE01001323 [OEOE] activated sludge metagenome; Activated Sludge 870 794 - Met CAT [ENA] ¢þ
>WENV181188157 OEOE01035184 [OEOE] activated sludge metagenome; Activated Sludge 14 90 + Met CAT [ENA] ¢þ
>WENV181189078 OEOF01000306 [OEOF] activated sludge metagenome; Activated Sludge 819 743 - Met CAT [ENA] ¢þ
>WENV181189109 OEOF01000786 [OEOF] activated sludge metagenome; Activated Sludge 14 90 + Met CAT [ENA] ¢þ
>WENV181189110 OEOF01000809 [OEOF] activated sludge metagenome; Activated Sludge 1492 1416 - Met CAT [ENA] ¢þ
>WENV181222542 OFDC01000006 [OFDC] hot springs metagenome; Water 208835 208911 + Met CAT [ENA] ¢þ
>WENV181222911 OFDC01000601 [OFDC] hot springs metagenome; Water 17600 17676 + Met CAT [ENA] ¢þ
>WENV181226788 OFDN01000069 [OFDN] hot springs metagenome; Water 7232 7308 + Met CAT [ENA] ¢þ
>WENV181226976 OFDN01000706 [OFDN] hot springs metagenome; Water 7742 7666 - Met CAT [ENA] ¢þ
>WENV181364839 OFPE01001373 [OFPE] sediment metagenome; Lake sediment 964 1040 + Met CAT [ENA] ¢þ
>WENV181380006 OFRD01020516 [OFRD] wastewater metagenome; Exp Tend CN 100WW 263 187 - Met CAT [ENA] ¢þ
>W141220068 AZXN01000001 Betaproteobacteria Methylophilus sp. 5 [AZXN] 1981348 1981272 - Met CAT [ENA] ¡û
>W141229537 BAMT01000004 Betaproteobacteria Methylobacillus glycogenes JCM 2850 [BAMT] 104458 104382 - Met CAT [ENA] ¡û
>W141231908 BAUS01000002 Betaproteobacteria Methylophilus sp. OH31 [BAUS] 299364 299288 - Met CAT [ENA] ¡û
>W141350152 JCKJ01000001 Betaproteobacteria Methylophilaceae bacterium 11 [JCKJ] 2108370 2108446 + Met CAT [ENA] ¡û
>WENV183726790 PJTO01000174 [PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment 22453 22377 - Met CAT [ENA] ¢þ
>WENV183729357 PJTQ01026786 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 331 255 - Met CAT [ENA] ¢þ
>WENV183736754 PJUD01000014 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 233075 232999 - Met CAT [ENA] ¢þ
>WENV183739455 PJUE01018712 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 594 670 + Met CAT [ENA] ¢þ
>WENV183740705 PJUF01007144 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 2506 2430 - Met CAT [ENA] ¢þ
>WENV170558843 CXWL01094896 [CXWL] groundwater metagenome; biofilm material 29059 29135 + Met CAT [ENA] ¢þ
>WENV170577544 FSSH01000144 [FSSH] freshwater metagenome; drinking water 168759 168835 + Met CAT [ENA] ¢þ
>WENV170601279 FUWD010165004 [FUWD] metagenome; unknown 120 44 - Met CAT [ENA] ¢þ
>WENV170654553 JRYL01000496 [JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different 226473 226549 + Met CAT [ENA] ¢þ
>WENV170705468 LNAO01000776 [LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 4835 4911 + Met CAT [ENA] ¢þ
>WENV170706538 LNAP01004033 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 22 98 + Met CAT [ENA] ¢þ
>WENV170707707 LNAP01030646 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 22 98 + Met CAT [ENA] ¢þ
>WENV170709203 LNFM01000180 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 147306 147382 + Met CAT [ENA] ¢þ
>WENV170710578 LNFM01002071 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 53156 53232 + Met CAT [ENA] ¢þ
>WENV170712341 LNFM01012234 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 96 20 - Met CAT [ENA] ¢þ
>WENV170961635 MLJW01000269 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 17411 17487 + Met CAT [ENA] ¢þ
>W09101009 AADX02000004 Betaproteobacteria Methylobacillus flagellatus KT [AADX] 157503 157579 + Met CAT [ENA] ¡û
>W141819378 JQMG01000001 Betaproteobacteria Methylotenera sp. L2L1 [JQMG] 1475583 1475507 - Met CAT [ENA] ¡û
>W1910547757 FZOA01000007 Betaproteobacteria Methylobacillus rhizosphaerae Ca-68 [FZOA] 58664 58588 - Met CAT [ENA] ¡û
>W1910730025 MHBU01000015 Betaproteobacteria Methylotenera sp. RIFCSPLOWO2_02_FULL_45_14 [MHBU] 1055 979 - Met CAT [ENA] ¡û
>C09107573 CP001674 Betaproteobacteria Methylovorus glucosotrophus SIP3-4 [CP001674] 2144338 2144414 + Met CAT [Ensembl] ¡û
>C09107800 CP001672 Betaproteobacteria Methylotenera mobilis JLW8 [CP001672] 2008640 2008716 + Met CAT [Ensembl] ¡û
>W1911624007 PQVH01000012 Betaproteobacteria Methylotenera oryzisoli La3113 [PQVH] 216362 216438 + Met CAT [ENA] ¡û
>SRA1003117 SRR002326.211703 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 86 162 + Met CAT [SRA]
>C151089475 CP012020 Betaproteobacteria Methylophilus sp. TWE2 [CP012020] 883794 883718 - Met CAT [Ensembl] ¡û
>ENV09000277 ABSN01042775 Freshwater sediment metagenome lwFormaldehyde_C1 347 271 - Met CAT [ENA] ¡û
>ENV09000418 ABSN01066352 Freshwater sediment metagenome lwFormaldehyde_C1 540 616 + Met CAT [ENA] ¡û
>ENV09000744 ABSP01028154 Freshwater sediment metagenome lwMethane_C1 831 755 - Met CAT [ENA] ¡û
>ENV09000772 ABSP01033361 Freshwater sediment metagenome lwMethane_C1 484 560 + Met CAT [ENA] ¡û
>ENV09000828 ABSP01046369 Freshwater sediment metagenome lwMethane_C1 239 315 + Met CAT [ENA] ¡û
>ENV09001278 ABSR01000108 Freshwater sediment metagenome lwMethylamine_C1 646 570 - Met CAT [ENA] ¡û
>ENV09001328 ABSR01001590 Freshwater sediment metagenome lwMethylamine_C1 665 741 + Met CAT [ENA] ¡û
>ENV09001339 ABSR01002162 Freshwater sediment metagenome lwMethylamine_C1 651 575 - Met CAT [ENA] ¡û
>ENV09001352 ABSR01002458 Freshwater sediment metagenome lwMethylamine_C1 1778 1854 + Met CAT [ENA] ¡û
>ENV09001416 ABSR01006001 Freshwater sediment metagenome lwMethylamine_C1 834 758 - Met CAT [ENA] ¡û
>ENV09001488 ABSR01016852 Freshwater sediment metagenome lwMethylamine_C1 552 628 + Met CAT [ENA] ¡û
>ENV09001555 ABSR01028671 Freshwater sediment metagenome lwMethylamine_C1 522 446 - Met CAT [ENA] ¡û
>ENV09001564 ABSR01030211 Freshwater sediment metagenome lwMethylamine_C1 509 585 + Met CAT [ENA] ¡û
>ENV09001573 ABSR01032591 Freshwater sediment metagenome lwMethylamine_C1 44 120 + Met CAT [ENA] ¡û
>ENV09001584 ABSR01033361 Freshwater sediment metagenome lwMethylamine_C1 559 635 + Met CAT [ENA] ¡û
>C10109356 CP002056 Betaproteobacteria Methylotenera versatilis 301 [CP002056] 2350881 2350957 + Met CAT [Ensembl] ¡û
>C11114207 CP002252 Betaproteobacteria Methylovorus sp. MP688 [CP002252] 2106268 2106344 + Met CAT [Ensembl] ¡û
>W1511431977 JUGE01000001 Betaproteobacteria Methylotenera sp. N17 [JUGE] 1765420 1765496 + Met CAT [ENA] ¡û
>W1511432030 JUGF01000002 Betaproteobacteria Methylotenera versatilis 7 [JUGF] 1333388 1333312 - Met CAT [ENA] ¡û
>W1511433384 JUHE01000001 Betaproteobacteria Methylophilus sp. Q8 [JUHE] 324182 324258 + Met CAT [ENA] ¡û
>W1511433544 JUHH01000001 Betaproteobacteria Methylotenera sp. G11 [JUHH] 2351455 2351379 - Met CAT [ENA] ¡û
>W1610740412 LMQQ01000001 Betaproteobacteria Methylophilus sp. Leaf414 [LMQQ] 743954 744030 + Met CAT [ENA] ¡û
>W1610740494 LMQS01000001 Betaproteobacteria Methylophilus sp. Leaf416 [LMQS] 687990 688066 + Met CAT [ENA] ¡û
>W1610740721 LMQX01000001 Betaproteobacteria Methylophilus sp. Leaf459 [LMQX] 687705 687781 + Met CAT [ENA] ¡û
>W1610753568 LNEP01000006 Betaproteobacteria Betaproteobacteria bacterium Ga0077540 [LNEP] 147355 147431 + Met CAT [ENA] ¡û
>W1611008620 LXUF01000001 Betaproteobacteria Methylovorus sp. MM2 MM1 [LXUF] 635058 634982 - Met CAT [ENA] ¡û
>W1710520768 FNFX01000001 Betaproteobacteria Methylophilus rhizosphaerae [FNFX] 693867 693943 + Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK