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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.160313 (232 seq.)
>W1710867162
LMIB01000001
Alphaproteobacteria
Sphingomonas sp. Root710 [LMIB]
1179641
1179717
+
Met
CAT
[ENA]
¡û
>W1711072890
LSIA01000057
Alphaproteobacteria
Novosphingobium sp. CCH12-A3 [LSIA]
45922
45998
+
Met
CAT
[ENA]
¡û
>W1711074111
LSJF01000384
Alphaproteobacteria
Sphingomonas sp. CCH9-H8 [LSJF]
1286
1210
-
Met
CAT
[ENA]
¡û
>W1711074408
LSJM01000405
Alphaproteobacteria
Sphingomonas sp. CCH9-E2 [LSJM]
10073
10149
+
Met
CAT
[ENA]
¡û
>W1711353123
MDDS01000013
Alphaproteobacteria
Sphingomonas turrisvirgatae MCT13 [MDDS]
17417
17341
-
Met
CAT
[ENA]
¡û
>W1711506414
MKWJ01000025
Alphaproteobacteria
Sphingomonas sp. 67-41 [MKWJ]
62231
62307
+
Met
CAT
[ENA]
¡û
>W1711632201
MPSB01000007
Alphaproteobacteria
Sphingomonas jeddahensis G39 [MPSB]
126702
126626
-
Met
CAT
[ENA]
¡û
>W1712049845
NFUR01000003
Alphaproteobacteria
Sphingomonas sp. IBVSS2 [NFUR]
88785
88861
+
Met
CAT
[ENA]
¡û
>C171084780
CP018820
Alphaproteobacteria
Sphingomonas koreensis ABOJV [CP018820]
2763460
2763536
+
Met
CAT
-
¡û
>WENV180032121
FTJU01243153
[FTJU] metagenome; soil
489
413
-
Ile2
CAT
[ENA]
¡û
>WENV180100125
OAOK01000028
[OAOK] sediment metagenome; sediment
82690
82766
+
Ile2
CAT
[ENA]
¡û
>WENV180100433
OAON01001593
[OAON] sediment metagenome; sediment
2144
2068
-
Ile2
CAT
[ENA]
¡û
>WENV180355097
OBNG01005691
[OBNG] sediment metagenome; sediment
150
74
-
Ile2
CAT
[ENA]
¡û
>WENV180355287
OBNH01000272
[OBNH] sediment metagenome; sediment
6325
6401
+
Ile2
CAT
[ENA]
¡û
>WENV180355506
OBNI01000141
[OBNI] sediment metagenome; sediment
16760
16684
-
Ile2
CAT
[ENA]
¡û
>WENV180355790
OBNJ01000440
[OBNJ] sediment metagenome; sediment
7920
7844
-
Ile2
CAT
[ENA]
¡û
>WENV180356216
OBNK01002087
[OBNK] sediment metagenome; sediment
430
354
-
Ile2
CAT
[ENA]
¡û
>WENV180396557
OBPV01019577
[OBPV] marine metagenome; ENVO:00002010
205
281
+
Ile2
CAT
[ENA]
¡û
>WENV180397799
OBPZ01009415
[OBPZ] marine metagenome; ENVO:00002010
571
647
+
Ile2
CAT
[ENA]
¡û
>WENV181223061
OFDC01001554
[OFDC] hot springs metagenome; Water
7235
7311
+
Ile2
CAT
[ENA]
¡û
>WENV181379307
OFRD01000394
[OFRD] wastewater metagenome; Exp Tend CN 100WW
16318
16242
-
Ile2
CAT
[ENA]
¡û
>WENV181400804
OFSF01025781
[OFSF] wastewater metagenome; Exp Tend VB 100WW
707
631
-
Ile2
CAT
[ENA]
¡û
>WENV181402725
OFTY01028485
[OFTY] sludge metagenome; sludge
222
146
-
Ile2
CAT
[ENA]
¡û
>WENV183733410
PJTY01001710
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
1476
1552
+
Ile2
CAT
[ENA]
¡û
>WENV183733897
PJTZ01000001
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
1465558
1465634
+
Ile2
CAT
[ENA]
¡û
>WENV183737333
PJUD01003875
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
3858
3782
-
Ile2
CAT
[ENA]
¡û
>WENV183744432
PJUK01027009
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
126
50
-
Ile2
CAT
[ENA]
¡û
>WENV183744832
PJUL01000350
[PJUL] feces metagenome; Chicken feces enriched on filter paper
13181
13257
+
Ile2
CAT
[ENA]
¡û
>WENV170003911
AGTN01498911
[AGTN] bioreactor metagenome; poplar biomass
177
253
+
Met
CAT
[ENA]
¡û
>WENV170010553
APMI01020413
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
2023
2099
+
Met
CAT
[ENA]
¡û
>WENV170476675
CEVI01163139
[CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
153
77
-
Met
CAT
[ENA]
¡û
>WENV170564981
CZQE01000051
[CZQE] hydrothermal vent metagenome; ocean water
1677
1601
-
Met
CAT
[ENA]
¡û
>WENV170579331
FUFK010038639
[FUFK] metagenome; unknown
37210
37134
-
Met
CAT
[ENA]
¡û
>WENV170581290
FUFK010060793
[FUFK] metagenome; unknown
16618
16542
-
Met
CAT
[ENA]
¡û
>WENV170583803
FUFK010164019
[FUFK] metagenome; unknown
201
125
-
Met
CAT
[ENA]
¡û
>WENV170592931
FUFK010828403
[FUFK] metagenome; unknown
2505
2581
+
Met
CAT
[ENA]
¡û
>WENV170717729
LSQX01047440
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
819
743
-
Met
CAT
[ENA]
¡û
>C191057056
CP028347
Alphaproteobacteria
Novosphingobium sp. THN1 [CP028347]
2041915
2041839
-
Met
CAT
-
¡û
>W1911139263
NOXT01000088
Alphaproteobacteria
Sandarakinorhabdus sp. TH057 [NOXT]
24600
24676
+
Met
CAT
[ENA]
¡û
>W1911687919
QLJC01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env8_1116 [QLJC]
108066
108142
+
Met
CAT
[ENA]
¡û
>W1911687958
QLJD01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env4_1116 [QLJD]
491881
491805
-
Met
CAT
[ENA]
¡û
>W1911688007
QLJE01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env3_1116 [QLJE]
261206
261282
+
Met
CAT
[ENA]
¡û
>W1911688057
QLJF01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env2_1116 [QLJF]
260996
261072
+
Met
CAT
[ENA]
¡û
>W1911688103
QLJG01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt6_1016 [QLJG]
238592
238516
-
Met
CAT
[ENA]
¡û
>W1911688220
QLJI01000011
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt4_0816 [QLJI]
155908
155984
+
Met
CAT
[ENA]
¡û
>W1911688246
QLJJ01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt2_0716 [QLJJ]
274930
274854
-
Met
CAT
[ENA]
¡û
>W1911718470
QQWJ01000007
Alphaproteobacteria
Sphingomonas koreensis KCTC 2883 [QQWJ]
72534
72458
-
Met
CAT
[ENA]
¡û
>W1911718517
QQWK01000010
Alphaproteobacteria
Sphingomonas koreensis KCTC 2882 [QQWK]
72534
72458
-
Met
CAT
[ENA]
¡û
>W1911718543
QQWL01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env11_0417 [QQWL]
260623
260699
+
Met
CAT
[ENA]
¡û
>W1911718596
QQWM01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env15_0417 [QQWM]
356925
357001
+
Met
CAT
[ENA]
¡û
>W1911718660
QQWN01000020
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env12_0417 [QQWN]
96686
96610
-
Met
CAT
[ENA]
¡û
>W1911718695
QQWO01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env10_0317 [QQWO]
261415
261491
+
Met
CAT
[ENA]
¡û
>W1911718735
QQWP01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NY1_0417 [QQWP]
73272
73196
-
Met
CAT
[ENA]
¡û
>W1911718778
QQWQ01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env9_0217 [QQWQ]
238491
238415
-
Met
CAT
[ENA]
¡û
>W1911718822
QQWR01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt10_0210 [QQWR]
260993
261069
+
Met
CAT
[ENA]
¡û
>W1911718874
QQWS01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt9_0208 [QQWS]
238473
238397
-
Met
CAT
[ENA]
¡û
>W1911718916
QQWT01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt8_0208 [QQWT]
238492
238416
-
Met
CAT
[ENA]
¡û
>W1911718960
QQWU01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt7_0906 [QQWU]
238519
238443
-
Met
CAT
[ENA]
¡û
>W1911719256
QQXA01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt14_0612 [QQXA]
238553
238477
-
Met
CAT
[ENA]
¡û
>W1911719302
QQXB01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt16_1112 [QQXB]
238482
238406
-
Met
CAT
[ENA]
¡û
>W1911719350
QQXC01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt11_0411 [QQXC]
96686
96610
-
Met
CAT
[ENA]
¡û
>W1911719380
QQXD01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt12_0112 [QQXD]
73193
73117
-
Met
CAT
[ENA]
¡û
>W1911719435
QQXE01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env5_1116 [QQXE]
260681
260757
+
Met
CAT
[ENA]
¡û
>W1911719486
QQXF01000007
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env7_1116 [QQXF]
260623
260699
+
Met
CAT
[ENA]
¡û
>W1911719520
QQXG01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env1_1016 [QQXG]
238518
238442
-
Met
CAT
[ENA]
¡û
>W1911719845
QQXQ01000011
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env56_1217 [QQXQ]
155908
155984
+
Met
CAT
[ENA]
¡û
>W1911719867
QQXR01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env55_1217 [QQXR]
336610
336534
-
Met
CAT
[ENA]
¡û
>W1911719904
QQXS01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env54_1217 [QQXS]
336610
336534
-
Met
CAT
[ENA]
¡û
>W1911719955
QQXT01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env57_1217 [QQXT]
260663
260739
+
Met
CAT
[ENA]
¡û
>W1911719994
QQXU01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env53_1017 [QQXU]
336610
336534
-
Met
CAT
[ENA]
¡û
>W1911720052
QQXV01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env52_1017 [QQXV]
336588
336512
-
Met
CAT
[ENA]
¡û
>W1911720096
QQXW01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env51_1017 [QQXW]
238508
238432
-
Met
CAT
[ENA]
¡û
>W1911720142
QQXX01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env50_1017 [QQXX]
238501
238425
-
Met
CAT
[ENA]
¡û
>W1911720188
QQXY01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env47_1017 [QQXY]
274969
274893
-
Met
CAT
[ENA]
¡û
>W1911720235
QQXZ01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env46_1017 [QQXZ]
238463
238387
-
Met
CAT
[ENA]
¡û
>W1911720275
QQYA01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env49_1017 [QQYA]
146271
146347
+
Met
CAT
[ENA]
¡û
>W1911720321
QQYB01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env48_1017 [QQYB]
146271
146347
+
Met
CAT
[ENA]
¡û
>W1911720368
QQYC01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env45_1017 [QQYC]
274934
274858
-
Met
CAT
[ENA]
¡û
>W1911720408
QQYD01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env44_0817 [QQYD]
12524
12600
+
Met
CAT
[ENA]
¡û
>W1911720468
QQYE01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env43_0817 [QQYE]
238468
238392
-
Met
CAT
[ENA]
¡û
>W1911720507
QQYF01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env42_0817 [QQYF]
14702
14626
-
Met
CAT
[ENA]
¡û
>W1911720548
QQYG01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env41_0817 [QQYG]
96686
96610
-
Met
CAT
[ENA]
¡û
>W1911720587
QQYH01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env40_0817 [QQYH]
96686
96610
-
Met
CAT
[ENA]
¡û
>W1911720635
QQYI01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env39_0817 [QQYI]
336604
336528
-
Met
CAT
[ENA]
¡û
>W1911720678
QQYJ01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env36_0717 [QQYJ]
238501
238425
-
Met
CAT
[ENA]
¡û
>W1911720732
QQYK01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env38_0817 [QQYK]
336605
336529
-
Met
CAT
[ENA]
¡û
>W1911720768
QQYL01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env37_0717 [QQYL]
336616
336540
-
Met
CAT
[ENA]
¡û
>W1911720819
QQYM01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env35_0717 [QQYM]
238468
238392
-
Met
CAT
[ENA]
¡û
>W1911720878
QQYN01000007
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env34_0717 [QQYN]
238555
238479
-
Met
CAT
[ENA]
¡û
>W1911720912
QQYO01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env33_0717 [QQYO]
238485
238409
-
Met
CAT
[ENA]
¡û
>W1911720964
QQYP01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env32_0717 [QQYP]
336615
336539
-
Met
CAT
[ENA]
¡û
>W1911720993
QQYQ01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env31_0717 [QQYQ]
238492
238416
-
Met
CAT
[ENA]
¡û
>W1911721038
QQYR01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env30_0717 [QQYR]
336616
336540
-
Met
CAT
[ENA]
¡û
>W1911721092
QQYS01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env29_0717 [QQYS]
336606
336530
-
Met
CAT
[ENA]
¡û
>W1911721133
QQYT01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env28_0717 [QQYT]
260997
261073
+
Met
CAT
[ENA]
¡û
>W1911721190
QQYU01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env27_0717 [QQYU]
77432
77356
-
Met
CAT
[ENA]
¡û
>W1911721236
QQYV01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env26_0717 [QQYV]
77472
77396
-
Met
CAT
[ENA]
¡û
>W1911721271
QQYW01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env25_0717 [QQYW]
358211
358287
+
Met
CAT
[ENA]
¡û
>W1911721330
QQYX01000007
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env24_0717 [QQYX]
238500
238424
-
Met
CAT
[ENA]
¡û
>W1911721389
QQYY01000013
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env23_0717 [QQYY]
96686
96610
-
Met
CAT
[ENA]
¡û
>W1911721401
QQYZ01000002
Alphaproteobacteria
Sphingomonas koreensis SK-CDC1_0717 [QQYZ]
273987
274063
+
Met
CAT
[ENA]
¡û
>W1911721446
QQZA01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env20_0617 [QQZA]
238491
238415
-
Met
CAT
[ENA]
¡û
>W1911721493
QQZB01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env19_0617 [QQZB]
96686
96610
-
Met
CAT
[ENA]
¡û
>W1911721536
QQZC01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env22_0617 [QQZC]
238519
238443
-
Met
CAT
[ENA]
¡û
>W1911721594
QQZD01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env21_0617 [QQZD]
336610
336534
-
Met
CAT
[ENA]
¡û
>W1911721633
QQZE01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env18_0517 [QQZE]
14702
14626
-
Met
CAT
[ENA]
¡û
>W1911721680
QQZF01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env16_0517 [QQZF]
238468
238392
-
Met
CAT
[ENA]
¡û
>W1911721723
QQZG01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env14_0417 [QQZG]
506
582
+
Met
CAT
[ENA]
¡û
>W1911721766
QQZH01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env13_0417 [QQZH]
260975
261051
+
Met
CAT
[ENA]
¡û
>W1911721812
QQZI01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env17_0517 [QQZI]
260975
261051
+
Met
CAT
[ENA]
¡û
>W1911765777
QXDC01000002
Alphaproteobacteria
Hephaestia caeni DSM 25527 [QXDC]
1190903
1190827
-
Met
CAT
[ENA]
¡û
>W1911783373
QXTF01000001
Alphaproteobacteria
Sphingomonas sp. DAC4 [QXTF]
151689
151613
-
Met
CAT
[ENA]
¡û
>W1810089093
PGEN01000001
Alphaproteobacteria
Sphingomonas koreensis JSS26 [PGEN]
36986
37062
+
Met
CAT
[ENA]
¡û
>W1810475056
QAIS01000332
Alphaproteobacteria
Sphingomonas sp. HMWF008 [QAIS]
2085
2009
-
Met
CAT
[ENA]
¡û
>W1810577294
QEOD01000002
Alphaproteobacteria
Sphingomonas sp. CF311 [QEOD]
687135
687211
+
Met
CAT
[ENA]
¡û
>W1810779166
QQNB01000001
Alphaproteobacteria
Sphingomonas aracearum WZY 27 [QQNB]
425855
425931
+
Met
CAT
[ENA]
¡û
>W2010370531
CAHJXA010000029
Alphaproteobacteria
Sphingomonas bacterium [CAHJXA]
10758
10833
+
Ile2
CAT
[ENA]
¡û
>W2010560019
JAASQP010000001
Alphaproteobacteria
Sphingomonas japonica DSM 22753 [JAASQP]
77189
77113
-
Ile2
CAT
[ENA]
¡û
>W2010560269
JAASQV010000001
Alphaproteobacteria
Sphingomonas leidyi DSM 4733 [JAASQV]
1337932
1338008
+
Ile2
CAT
[ENA]
¡û
>W2010585602
JABAID010000006
Alphaproteobacteria
Novosphingobium sp. ERN07 [JABAID]
72320
72244
-
Ile2
CAT
[ENA]
¡û
>W2010641900
JABWGV010000001
Alphaproteobacteria
Altererythrobacter sp. HHU K3-1 [JABWGV]
993077
993153
+
Ile2
CAT
[ENA]
¡û
>W2010674382
JACCFG010000001
Alphaproteobacteria
Sphingomonas sp. R-74633 [JACCFG]
707129
707205
+
Ile2
CAT
[ENA]
¡û
>W2010708507
JACHLN010000002
Alphaproteobacteria
Sphingomonas kyeonggiensis S00224 [JACHLN]
711122
711046
-
Ile2
CAT
[ENA]
¡û
>W2010712009
JACHOA010000007
Alphaproteobacteria
Novosphingobium taihuense DSM 17507 [JACHOA]
92729
92805
+
Ile2
CAT
[ENA]
¡û
>W2010725605
JACIEH010000001
Alphaproteobacteria
Sphingomonas kyeonggiensis DSM 101806 [JACIEH]
1123097
1123173
+
Ile2
CAT
[ENA]
¡û
>W2011014763
NOXT01000088
Alphaproteobacteria
Sandarakinorhabdus sp. TH057 [NOXT]
24600
24676
+
Ile2
CAT
[ENA]
¡û
>W2011269348
QLJC01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env8_1116 [QLJC]
108066
108142
+
Ile2
CAT
[ENA]
¡û
>W2011269387
QLJD01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env4_1116 [QLJD]
491881
491805
-
Ile2
CAT
[ENA]
¡û
>W2011269436
QLJE01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env3_1116 [QLJE]
261206
261282
+
Ile2
CAT
[ENA]
¡û
>W2011269486
QLJF01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env2_1116 [QLJF]
260996
261072
+
Ile2
CAT
[ENA]
¡û
>W2011269532
QLJG01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt6_1016 [QLJG]
238592
238516
-
Ile2
CAT
[ENA]
¡û
>W2011269649
QLJI01000011
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt4_0816 [QLJI]
155908
155984
+
Ile2
CAT
[ENA]
¡û
>W2011269675
QLJJ01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt2_0716 [QLJJ]
274930
274854
-
Ile2
CAT
[ENA]
¡û
>W2011286460
QQWJ01000007
Alphaproteobacteria
Sphingomonas koreensis KCTC 2883 [QQWJ]
72534
72458
-
Ile2
CAT
[ENA]
¡û
>W2011286507
QQWK01000010
Alphaproteobacteria
Sphingomonas koreensis KCTC 2882 [QQWK]
72534
72458
-
Ile2
CAT
[ENA]
¡û
>W2011286533
QQWL01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env11_0417 [QQWL]
260623
260699
+
Ile2
CAT
[ENA]
¡û
>W2011286586
QQWM01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env15_0417 [QQWM]
356925
357001
+
Ile2
CAT
[ENA]
¡û
>W2011286650
QQWN01000020
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env12_0417 [QQWN]
96686
96610
-
Ile2
CAT
[ENA]
¡û
>W2011286685
QQWO01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env10_0317 [QQWO]
261415
261491
+
Ile2
CAT
[ENA]
¡û
>W2011286725
QQWP01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NY1_0417 [QQWP]
73272
73196
-
Ile2
CAT
[ENA]
¡û
>W2011286768
QQWQ01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env9_0217 [QQWQ]
238491
238415
-
Ile2
CAT
[ENA]
¡û
>W2011286812
QQWR01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt10_0210 [QQWR]
260993
261069
+
Ile2
CAT
[ENA]
¡û
>W2011286864
QQWS01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt9_0208 [QQWS]
238473
238397
-
Ile2
CAT
[ENA]
¡û
>W2011286906
QQWT01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt8_0208 [QQWT]
238492
238416
-
Ile2
CAT
[ENA]
¡û
>W2011286950
QQWU01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt7_0906 [QQWU]
238519
238443
-
Ile2
CAT
[ENA]
¡û
>W2011287246
QQXA01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt14_0612 [QQXA]
238553
238477
-
Ile2
CAT
[ENA]
¡û
>W2011287292
QQXB01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt16_1112 [QQXB]
238482
238406
-
Ile2
CAT
[ENA]
¡û
>W2011287340
QQXC01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt11_0411 [QQXC]
96686
96610
-
Ile2
CAT
[ENA]
¡û
>W2011287370
QQXD01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Pt12_0112 [QQXD]
73193
73117
-
Ile2
CAT
[ENA]
¡û
>W2011287425
QQXE01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env5_1116 [QQXE]
260681
260757
+
Ile2
CAT
[ENA]
¡û
>W2011287476
QQXF01000007
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env7_1116 [QQXF]
260623
260699
+
Ile2
CAT
[ENA]
¡û
>W2011287510
QQXG01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env1_1016 [QQXG]
238518
238442
-
Ile2
CAT
[ENA]
¡û
>W2011287835
QQXQ01000011
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env56_1217 [QQXQ]
155908
155984
+
Ile2
CAT
[ENA]
¡û
>W2011287857
QQXR01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env55_1217 [QQXR]
336610
336534
-
Ile2
CAT
[ENA]
¡û
>W2011287894
QQXS01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env54_1217 [QQXS]
336610
336534
-
Ile2
CAT
[ENA]
¡û
>W2011287945
QQXT01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env57_1217 [QQXT]
260663
260739
+
Ile2
CAT
[ENA]
¡û
>W2011287984
QQXU01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env53_1017 [QQXU]
336610
336534
-
Ile2
CAT
[ENA]
¡û
>W2011288042
QQXV01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env52_1017 [QQXV]
336588
336512
-
Ile2
CAT
[ENA]
¡û
>W2011288086
QQXW01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env51_1017 [QQXW]
238508
238432
-
Ile2
CAT
[ENA]
¡û
>W2011288132
QQXX01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env50_1017 [QQXX]
238501
238425
-
Ile2
CAT
[ENA]
¡û
>W2011288178
QQXY01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env47_1017 [QQXY]
274969
274893
-
Ile2
CAT
[ENA]
¡û
>W2011288225
QQXZ01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env46_1017 [QQXZ]
238463
238387
-
Ile2
CAT
[ENA]
¡û
>W2011288265
QQYA01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env49_1017 [QQYA]
146271
146347
+
Ile2
CAT
[ENA]
¡û
>W2011288311
QQYB01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env48_1017 [QQYB]
146271
146347
+
Ile2
CAT
[ENA]
¡û
>W2011288358
QQYC01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env45_1017 [QQYC]
274934
274858
-
Ile2
CAT
[ENA]
¡û
>W2011288398
QQYD01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env44_0817 [QQYD]
12524
12600
+
Ile2
CAT
[ENA]
¡û
>W2011288458
QQYE01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env43_0817 [QQYE]
238468
238392
-
Ile2
CAT
[ENA]
¡û
>W2011288497
QQYF01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env42_0817 [QQYF]
14702
14626
-
Ile2
CAT
[ENA]
¡û
>W2011288538
QQYG01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env41_0817 [QQYG]
96686
96610
-
Ile2
CAT
[ENA]
¡û
>W2011288577
QQYH01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env40_0817 [QQYH]
96686
96610
-
Ile2
CAT
[ENA]
¡û
>W2011288625
QQYI01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env39_0817 [QQYI]
336604
336528
-
Ile2
CAT
[ENA]
¡û
>W2011288668
QQYJ01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env36_0717 [QQYJ]
238501
238425
-
Ile2
CAT
[ENA]
¡û
>W2011288722
QQYK01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env38_0817 [QQYK]
336605
336529
-
Ile2
CAT
[ENA]
¡û
>W2011288758
QQYL01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env37_0717 [QQYL]
336616
336540
-
Ile2
CAT
[ENA]
¡û
>W2011288809
QQYM01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env35_0717 [QQYM]
238468
238392
-
Ile2
CAT
[ENA]
¡û
>W2011288868
QQYN01000007
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env34_0717 [QQYN]
238555
238479
-
Ile2
CAT
[ENA]
¡û
>W2011288902
QQYO01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env33_0717 [QQYO]
238485
238409
-
Ile2
CAT
[ENA]
¡û
>W2011288954
QQYP01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env32_0717 [QQYP]
336615
336539
-
Ile2
CAT
[ENA]
¡û
>W2011288983
QQYQ01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env31_0717 [QQYQ]
238492
238416
-
Ile2
CAT
[ENA]
¡û
>W2011289028
QQYR01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env30_0717 [QQYR]
336616
336540
-
Ile2
CAT
[ENA]
¡û
>W2011289082
QQYS01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env29_0717 [QQYS]
336606
336530
-
Ile2
CAT
[ENA]
¡û
>W2011289123
QQYT01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env28_0717 [QQYT]
260997
261073
+
Ile2
CAT
[ENA]
¡û
>W2011289180
QQYU01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env27_0717 [QQYU]
77432
77356
-
Ile2
CAT
[ENA]
¡û
>W2011289226
QQYV01000005
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env26_0717 [QQYV]
77472
77396
-
Ile2
CAT
[ENA]
¡û
>W2011289261
QQYW01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env25_0717 [QQYW]
358211
358287
+
Ile2
CAT
[ENA]
¡û
>W2011289320
QQYX01000007
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env24_0717 [QQYX]
238500
238424
-
Ile2
CAT
[ENA]
¡û
>W2011289379
QQYY01000013
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env23_0717 [QQYY]
96686
96610
-
Ile2
CAT
[ENA]
¡û
>W2011289391
QQYZ01000002
Alphaproteobacteria
Sphingomonas koreensis SK-CDC1_0717 [QQYZ]
273987
274063
+
Ile2
CAT
[ENA]
¡û
>W2011289436
QQZA01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env20_0617 [QQZA]
238491
238415
-
Ile2
CAT
[ENA]
¡û
>W2011289483
QQZB01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env19_0617 [QQZB]
96686
96610
-
Ile2
CAT
[ENA]
¡û
>W2011289526
QQZC01000001
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env22_0617 [QQZC]
238519
238443
-
Ile2
CAT
[ENA]
¡û
>W2011289584
QQZD01000004
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env21_0617 [QQZD]
336610
336534
-
Ile2
CAT
[ENA]
¡û
>W2011289623
QQZE01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env18_0517 [QQZE]
14702
14626
-
Ile2
CAT
[ENA]
¡û
>W2011289670
QQZF01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env16_0517 [QQZF]
238468
238392
-
Ile2
CAT
[ENA]
¡û
>W2011289713
QQZG01000003
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env14_0417 [QQZG]
506
582
+
Ile2
CAT
[ENA]
¡û
>W2011289756
QQZH01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env13_0417 [QQZH]
260975
261051
+
Ile2
CAT
[ENA]
¡û
>W2011289802
QQZI01000002
Alphaproteobacteria
Sphingomonas koreensis SK-NIH.Env17_0517 [QQZI]
260975
261051
+
Ile2
CAT
[ENA]
¡û
>W2011520912
RZUL01000004
Alphaproteobacteria
Sphingobium sp. TLA-22 [RZUL]
8851
8775
-
Ile2
CAT
[ENA]
¡û
>W2011537686
SCMK01000005
Alphaproteobacteria
Sphingomonas sp. 1F27F7B [SCMK]
83587
83663
+
Ile2
CAT
[ENA]
¡û
>W2011538788
SCNF01000045
Alphaproteobacteria
Sphingomonas sp. 3F27E9-B [SCNF]
29727
29651
-
Ile2
CAT
[ENA]
¡û
>W2011647503
SNWD01000001
Alphaproteobacteria
Stakelama pacifica DSM 25059 [SNWD]
275736
275812
+
Ile2
CAT
[ENA]
¡û
>W2011993291
VDYR01000001
Alphaproteobacteria
Sphingomonas japonica KC 7T [VDYR]
1384006
1383930
-
Ile2
CAT
[ENA]
¡û
>W2012081390
VLKJ01000006
Alphaproteobacteria
Novosphingobium taihuense CGMCC 1.3432 [VLKJ]
92933
93009
+
Ile2
CAT
[ENA]
¡û
>W2110030772
BMLU01000001
Alphaproteobacteria
Stakelama pacifica CGMCC 1.7294 [BMLU]
275756
275832
+
Ile2
CAT
[ENA]
¡û
>W2110372066
JADQDC010000013
Alphaproteobacteria
Novosphingobium jiangmenense 1Y9A [JADQDC]
4585
4509
-
Ile2
CAT
[ENA]
¡û
>W2110567503
JAGRQC010000001
Alphaproteobacteria
Sphingomonadaceae bacterium LXI357 [JAGRQC]
697338
697414
+
Ile2
CAT
[ENA]
¡û
>W2110659179
JAHWZX010000006
Alphaproteobacteria
Stakelama sp. CBK3Z-3 [JAHWZX]
74674
74750
+
Ile2
CAT
[ENA]
¡û
>W2110694492
JAIQXT010000010
Alphaproteobacteria
Sphingomonas sp. R647 [JAIQXT]
105994
105918
-
Ile2
CAT
[ENA]
¡û
>C211060345
CP043639
Alphaproteobacteria
Sphingomonas sp. NBWT7 [CP043639]
1127724
1127799
+
Ile2
CAT
-
¡û
>C211134423
CP060494
Alphaproteobacteria
Sphingosinithalassobacter sp. CS137 [CP060494]
456635
456559
-
Ile2
CAT
-
¡û
>C211177368
CP063445
Alphaproteobacteria
Novosphingobium sp. ES2-1 [CP063445]
2201408
2201484
+
Ile2
CAT
-
¡û
>C231287032
CP090949
Alphaproteobacteria
Erythrobacter aurantius C5 [CP090949]
3195300
3195376
+
Ile2
CAT
-
¡û
>C231406600
CP098774
Alphaproteobacteria
Sphingomonas sp. QA11 [CP098774]
1653228
1653304
+
Ile2
CAT
-
¡û
>C231562608
CP114791
Alphaproteobacteria
Sphingomonas sp. NIBR 02145 [CP114791]
659166
659242
+
Ile2
CAT
-
¡û
>C231619968
CP119314
Alphaproteobacteria
Sphingomonas sp. [CP119314]
1158915
1158991
+
Ile2
CAT
-
¡û
>C241133198
CP049109
Alphaproteobacteria
Sphingosinithalassobacter tenebrarum zrk23 [CP049109]
1867478
1867554
+
Ile2
CAT
-
¡û
>W1511357030
JRVC01000023
Alphaproteobacteria
Novosphingobium subterraneum DSM 12447 [JRVC]
57487
57411
-
Met
CAT
[ENA]
¡û
>W1511390151
JSXI01000041
Alphaproteobacteria
Sphingomonas sp. ERG5 [JSXI]
54372
54448
+
Met
CAT
[ENA]
¡û
>W1610071185
BCTW01000008
Alphaproteobacteria
Novosphingobium lentum NBRC 107847 [BCTW]
130819
130743
-
Met
CAT
[ENA]
¡û
>W1610076615
BCYW01000016
Alphaproteobacteria
Sphingomonas koreensis NBRC 16723 [BCYW]
26422
26498
+
Met
CAT
[ENA]
¡û
>W1610076760
BCYZ01000059
Alphaproteobacteria
Sphingomonas pruni NBRC 15498 [BCYZ]
20654
20578
-
Met
CAT
[ENA]
¡û
>W1610077058
BCZF01000039
Alphaproteobacteria
Novosphingobium subterraneum NBRC 16086 [BCZF]
8379
8455
+
Met
CAT
[ENA]
¡û
>W1610729508
LMIB01000001
Alphaproteobacteria
Sphingomonas sp. Root710 [LMIB]
1179641
1179717
+
Met
CAT
[ENA]
¡û
>W1610912150
LSIA01000057
Alphaproteobacteria
Novosphingobium sp. CCH12-A3 [LSIA]
45922
45998
+
Met
CAT
[ENA]
¡û
>W1610913416
LSJF01000384
Alphaproteobacteria
Sphingomonas sp. CCH9-H8 [LSJF]
1286
1210
-
Met
CAT
[ENA]
¡û
>W1610913713
LSJM01000405
Alphaproteobacteria
Sphingomonas sp. CCH9-E2 [LSJM]
10073
10149
+
Met
CAT
[ENA]
¡û
>W1710068550
BCTW01000008
Alphaproteobacteria
Novosphingobium lentum NBRC 107847 [BCTW]
130819
130743
-
Met
CAT
[ENA]
¡û
>W1710074304
BCYW01000016
Alphaproteobacteria
Sphingomonas koreensis NBRC 16723 [BCYW]
26422
26498
+
Met
CAT
[ENA]
¡û
>W1710074449
BCYZ01000059
Alphaproteobacteria
Sphingomonas pruni NBRC 15498 [BCYZ]
20654
20578
-
Met
CAT
[ENA]
¡û
>W1710074747
BCZF01000039
Alphaproteobacteria
Novosphingobium subterraneum NBRC 16086 [BCZF]
8379
8455
+
Met
CAT
[ENA]
¡û
>W1710083100
BDJB01000008
Alphaproteobacteria
Sphingomonas sp. TZW2008 [BDJB]
133658
133734
+
Met
CAT
[ENA]
¡û
>W1710605974
FWXL01000003
Alphaproteobacteria
Novosphingobium sp. B1 [FWXL]
148383
148459
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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